RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 ALDH1L1O75891 902 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
TMEM54-203ENST00000463914 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
TMEM54-203ENST00000463914 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
TMEM54-203ENST00000463914 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 PTPN22Q9Y2R2 807 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 HTTP42858 3142 aa12.95□□□□□ -0.34
TMEM54-203ENST00000463914 TESPA1A2RU30 521 aaPredicted RBP12.94□□□□□ -0.34
TMEM54-203ENST00000463914 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
TMEM54-203ENST00000463914 CRKP46108 304 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 CACNB3P54284 484 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 CHAF1AQ13111 956 aaPredicted RBP12.94□□□□□ -0.34
TMEM54-203ENST00000463914 VGLL4Q14135 290 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 OTUD7BQ6GQQ9 843 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 EFCC1Q9HA90 598 aa12.94□□□□□ -0.34
TMEM54-203ENST00000463914 SP3Q02447 781 aa12.93□□□□□ -0.34
TMEM54-203ENST00000463914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM54-203ENST00000463914 ARMC5Q96C12 935 aa12.93□□□□□ -0.34
TMEM54-203ENST00000463914 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
TMEM54-203ENST00000463914 BICC1Q9H694 974 aaKnown RBP12.93□□□□□ -0.34
TMEM54-203ENST00000463914 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
TMEM54-203ENST00000463914 CCL15-CCL14A0A0B4J2E2 113 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
TMEM54-203ENST00000463914 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
TMEM54-203ENST00000463914 CCL15Q16663 113 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 LRRC24Q50LG9 513 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
TMEM54-203ENST00000463914 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
TMEM54-203ENST00000463914 UTYO14607 1347 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
TMEM54-203ENST00000463914 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 KLHDC4Q8TBB5 520 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 CSADQ9Y600 493 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
TMEM54-203ENST00000463914 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 ANP32CO43423 234 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 TNNI2P48788 182 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 GTF2A2P52657 109 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 ZNF333Q96JL9 665 aa12.9□□□□□ -0.34
TMEM54-203ENST00000463914 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-203ENST00000463914 BCAMP50895 628 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 TBC1D22AQ8WUA7 517 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 ARHGAP39Q9C0H5 1083 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
TMEM54-203ENST00000463914 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 PDE8BO95263 885 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
TMEM54-203ENST00000463914 HDLBPQ00341 1268 aaKnown RBP12.88□□□□□ -0.35
TMEM54-203ENST00000463914 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
TMEM54-203ENST00000463914 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
TMEM54-203ENST00000463914 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
TMEM54-203ENST00000463914 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
TMEM54-203ENST00000463914 IRF6O14896 467 aa12.87□□□□□ -0.35
TMEM54-203ENST00000463914 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-203ENST00000463914 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
TMEM54-203ENST00000463914 ERO1BQ86YB8 467 aa12.87□□□□□ -0.35
TMEM54-203ENST00000463914 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
TMEM54-203ENST00000463914 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-203ENST00000463914 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
TMEM54-203ENST00000463914 DOCK2Q92608 1830 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 FGFR2P21802 821 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 INPP5BP32019 993 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
TMEM54-203ENST00000463914 FAM83AQ86UY5 434 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 MAST3O60307 1309 aa12.86□□□□□ -0.35
TMEM54-203ENST00000463914 TLR2O60603 784 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 IFIT1P09914 478 aaKnown RBP12.85□□□□□ -0.35
TMEM54-203ENST00000463914 CETPP11597 493 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
TMEM54-203ENST00000463914 PPIL2Q13356 520 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 SNAPC2Q13487 334 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
TMEM54-203ENST00000463914 CENPFP49454 3210 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
TMEM54-203ENST00000463914 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms