RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 KLHDC4Q8TBB5 520 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 PSME4Q14997 1843 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 FOXN1O15353 648 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 CRKP46108 304 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
COMMD3-205ENST00000463688 SREBF2Q12772 1141 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
COMMD3-205ENST00000463688 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
COMMD3-205ENST00000463688 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
COMMD3-205ENST00000463688 SLC10A3P09131 477 aa16.6■□□□□ 0.25
COMMD3-205ENST00000463688 PRMT6Q96LA8 375 aaPredicted RBP16.6■□□□□ 0.25
COMMD3-205ENST00000463688 ZDHHC15Q96MV8 337 aa16.6■□□□□ 0.25
COMMD3-205ENST00000463688 PCNTO95613 3336 aa16.59■□□□□ 0.25
COMMD3-205ENST00000463688 LDHBP07195 334 aaKnown RBP16.59■□□□□ 0.25
COMMD3-205ENST00000463688 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
COMMD3-205ENST00000463688 SPDYE2Q495Y8 402 aa16.59■□□□□ 0.25
COMMD3-205ENST00000463688 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
COMMD3-205ENST00000463688 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
COMMD3-205ENST00000463688 SPEF2Q9C093 1822 aa16.58■□□□□ 0.25
COMMD3-205ENST00000463688 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.25
COMMD3-205ENST00000463688 ALDH1A1P00352 501 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 FAM83AQ86UY5 434 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 SLC10A4Q96EP9 437 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 GPR108Q9NPR9 543 aa16.58■□□□□ 0.24
COMMD3-205ENST00000463688 AOC2O75106 756 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-205ENST00000463688 UQCRFS1P1P0C7P4 283 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 LBX1P52954 281 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 RASA3Q14644 834 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 COL13A1Q5TAT6 717 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-205ENST00000463688 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 ZNF70Q9UC06 446 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-205ENST00000463688 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
COMMD3-205ENST00000463688 HSPA8P11142 646 aaKnown RBP16.56■□□□□ 0.24
COMMD3-205ENST00000463688 ATP8B2P98198 1209 aa16.56■□□□□ 0.24
COMMD3-205ENST00000463688 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-205ENST00000463688 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
COMMD3-205ENST00000463688 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
COMMD3-205ENST00000463688 IQSEC3Q9UPP2 1182 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-205ENST00000463688 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
COMMD3-205ENST00000463688 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 FAM155AB1AL88 458 aaPredicted RBP16.55■□□□□ 0.24
COMMD3-205ENST00000463688 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 HMMRO75330 724 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 WDHD1O75717 1129 aaPredicted RBP16.55■□□□□ 0.24
COMMD3-205ENST00000463688 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
COMMD3-205ENST00000463688 GSTO1P78417 241 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 CCDC158Q5M9N0 1113 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 ANKRD13AQ8IZ07 590 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
COMMD3-205ENST00000463688 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
COMMD3-205ENST00000463688 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
COMMD3-205ENST00000463688 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
COMMD3-205ENST00000463688 LDHCP07864 332 aa16.54■□□□□ 0.24
COMMD3-205ENST00000463688 TMED8Q6PL24 325 aaPredicted RBP16.54■□□□□ 0.24
COMMD3-205ENST00000463688 DZIP1Q86YF9 867 aaKnown RBP16.54■□□□□ 0.24
COMMD3-205ENST00000463688 RASAL3Q86YV0 1011 aa16.54■□□□□ 0.24
COMMD3-205ENST00000463688 TDRD3Q9H7E2 651 aaKnown RBP16.54■□□□□ 0.24
COMMD3-205ENST00000463688 RCAN3Q9UKA8 241 aa16.54■□□□□ 0.24
COMMD3-205ENST00000463688 TFCP2Q12800 502 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 XAGE2Q96GT9 111 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 CSADQ9Y600 493 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
COMMD3-205ENST00000463688 TIMM10P62072 90 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 POLA2Q14181 598 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 PRAMEF18Q5VWM3 479 aa16.53■□□□□ 0.24
COMMD3-205ENST00000463688 TM4SF4P48230 202 aa16.52■□□□□ 0.23
COMMD3-205ENST00000463688 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.23
COMMD3-205ENST00000463688 DLK2Q6UY11 383 aa16.52■□□□□ 0.23
COMMD3-205ENST00000463688 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
COMMD3-205ENST00000463688 CERS3Q8IU89 383 aa16.52■□□□□ 0.23
COMMD3-205ENST00000463688 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.23
COMMD3-205ENST00000463688 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.23
COMMD3-205ENST00000463688 CSRNP1Q96S65 589 aa16.52■□□□□ 0.23
COMMD3-205ENST00000463688 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.23
COMMD3-205ENST00000463688 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
COMMD3-205ENST00000463688 PHKA1P46020 1223 aa16.51■□□□□ 0.23
COMMD3-205ENST00000463688 PDE3AQ14432 1141 aa16.51■□□□□ 0.23
COMMD3-205ENST00000463688 APOBEC3HQ6NTF7 200 aaKnown RBP16.51■□□□□ 0.23
COMMD3-205ENST00000463688 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
COMMD3-205ENST00000463688 PNMA6EA0A0J9YXQ4 647 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 SPRYD7Q5W111 196 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 FAM151AQ8WW52 585 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 ZNF512BQ96KM6 892 aaPredicted RBP16.5■□□□□ 0.23
COMMD3-205ENST00000463688 THSD7BQ9C0I4 1608 aa16.5■□□□□ 0.23
COMMD3-205ENST00000463688 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-205ENST00000463688 PRKG1Q13976 671 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms