RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 GSTM4Q03013 218 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 SULF2Q8IWU5 870 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 CARD10Q9BWT7 1032 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 PRDM6Q9NQX0 595 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 INPP5FQ9Y2H2 1132 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 NME2P22392 152 aa6.97□□□□□ -1.29
HERC4-208ENST00000463478 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
HERC4-208ENST00000463478 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
HERC4-208ENST00000463478 PHC3Q8NDX5 983 aa6.97□□□□□ -1.29
HERC4-208ENST00000463478 TINF2Q9BSI4 451 aa6.97□□□□□ -1.29
HERC4-208ENST00000463478 ENAMQ9NRM1 1142 aa6.97□□□□□ -1.29
HERC4-208ENST00000463478 RNF225M0QZC1 329 aaPredicted RBP6.96□□□□□ -1.3
HERC4-208ENST00000463478 FSCN2O14926 492 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 NID1P14543 1247 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 TFE3P19532 575 aaPredicted RBP6.96□□□□□ -1.3
HERC4-208ENST00000463478 DGKGP49619 791 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 FAM160A1Q05DH4 1040 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 C19orf57Q0VDD7 668 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
HERC4-208ENST00000463478 AGMOQ6ZNB7 445 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 WNT8BQ93098 351 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 RHOVQ96L33 236 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 SPON2Q9BUD6 331 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
HERC4-208ENST00000463478 PF4P02776 101 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 BMP6P22004 513 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 EIF4A3P38919 411 aaKnown RBP6.95□□□□□ -1.3
HERC4-208ENST00000463478 RPS26P62854 115 aaKnown RBP6.95□□□□□ -1.3
HERC4-208ENST00000463478 PAK2Q13177 524 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
HERC4-208ENST00000463478 COL9A3Q14050 684 aaPredicted RBP6.95□□□□□ -1.3
HERC4-208ENST00000463478 SNAP47Q5SQN1 464 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 TRAPPC3LQ5T215 181 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 RASIP1Q5U651 963 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 EMILIN2Q9BXX0 1053 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
HERC4-208ENST00000463478 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
HERC4-208ENST00000463478 ARNTP27540 789 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 GSK3AP49840 483 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 LMNB2Q03252 620 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 LRRC14Q15048 493 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 LLGL2Q6P1M3 1020 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 GRIN3AQ8TCU5 1115 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 ZNF296Q8WUU4 475 aaPredicted RBP6.94□□□□□ -1.3
HERC4-208ENST00000463478 ZC3H12CQ9C0D7 883 aaKnown RBP6.94□□□□□ -1.3
HERC4-208ENST00000463478 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
HERC4-208ENST00000463478 CYP11A1P05108 521 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 GSTP1P09211 210 aaKnown RBP6.93□□□□□ -1.3
HERC4-208ENST00000463478 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
HERC4-208ENST00000463478 NLRP12P59046 1061 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 SEPT6Q14141 434 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 KLHL23Q8NBE8 558 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 GOLM1Q8NBJ4 401 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 SREK1Q8WXA9 508 aaKnown RBP6.93□□□□□ -1.3
HERC4-208ENST00000463478 KCNB2Q92953 911 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 KLHDC7BQ96G42 594 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 CORO1BQ9BR76 489 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 USP26Q9BXU7 913 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 MIR1-1HGQ9H1L0 117 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 CYP8B1Q9UNU6 501 aa6.93□□□□□ -1.3
HERC4-208ENST00000463478 SUPT16HQ9Y5B9 1047 aaKnown RBP6.93□□□□□ -1.3
HERC4-208ENST00000463478 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
HERC4-208ENST00000463478 MAOBP27338 520 aa6.92□□□□□ -1.3
HERC4-208ENST00000463478 DNAJA1P31689 397 aaKnown RBP6.92□□□□□ -1.3
HERC4-208ENST00000463478 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
HERC4-208ENST00000463478 POU4F3Q15319 338 aa6.92□□□□□ -1.3
HERC4-208ENST00000463478 MAP1SQ66K74 1059 aaPredicted RBP6.92□□□□□ -1.3
HERC4-208ENST00000463478 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
HERC4-208ENST00000463478 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
HERC4-208ENST00000463478 JARID2Q92833 1246 aaPredicted RBP6.92□□□□□ -1.3
HERC4-208ENST00000463478 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
HERC4-208ENST00000463478 DDX3YO15523 660 aaKnown RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 IGSF3O75054 1194 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 ECEL1O95672 775 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 GARTP22102 1010 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 GJA8P48165 433 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 SF3A1Q15459 793 aaKnown RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 BNC2Q6ZN30 1099 aaPredicted RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 PDZD3Q86UT5 571 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 TRIM11Q96F44 468 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 TANGO6Q9C0B7 1094 aa6.91□□□□□ -1.3
HERC4-208ENST00000463478 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
HERC4-208ENST00000463478 A0A0A0MRY4 1105 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
HERC4-208ENST00000463478 CD68P34810 354 aaPredicted RBP6.9□□□□□ -1.3
HERC4-208ENST00000463478 RAC1P63000 192 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms