RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PAPPA2Q9BXP8 1791 aa20.08■□□□□ 0.8
COL1A1-202ENST00000463440 A0A1B0GUL7 405 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 ADORA1P30542 326 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 PHKA1P46020 1223 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 ZNF157P51786 506 aaPredicted RBP20.07■□□□□ 0.8
COL1A1-202ENST00000463440 NOGQ13253 232 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
COL1A1-202ENST00000463440 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 TEKT1Q969V4 418 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 BEGAINQ9BUH8 593 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 MRIQ9BWK5 157 aa20.07■□□□□ 0.8
COL1A1-202ENST00000463440 FOXN1O15353 648 aa20.06■□□□□ 0.8
COL1A1-202ENST00000463440 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
COL1A1-202ENST00000463440 TNFAIP1Q13829 316 aa20.06■□□□□ 0.8
COL1A1-202ENST00000463440 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
COL1A1-202ENST00000463440 SPDYE2Q495Y8 402 aa20.06■□□□□ 0.8
COL1A1-202ENST00000463440 XAGE2Q96GT9 111 aa20.06■□□□□ 0.8
COL1A1-202ENST00000463440 NEUROD6Q96NK8 337 aa20.06■□□□□ 0.8
COL1A1-202ENST00000463440 TDRD3Q9H7E2 651 aaKnown RBP20.06■□□□□ 0.8
COL1A1-202ENST00000463440 ZNF70Q9UC06 446 aaPredicted RBP20.06■□□□□ 0.8
COL1A1-202ENST00000463440 ZBTB22O15209 634 aa20.05■□□□□ 0.8
COL1A1-202ENST00000463440 CTCFP49711 727 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-202ENST00000463440 AOX1Q06278 1338 aa20.04■□□□□ 0.8
COL1A1-202ENST00000463440 SURF6O75683 361 aaKnown RBP20.04■□□□□ 0.8
COL1A1-202ENST00000463440 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
COL1A1-202ENST00000463440 ARMC9Q7Z3E5 817 aa20.04■□□□□ 0.8
COL1A1-202ENST00000463440 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
COL1A1-202ENST00000463440 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
COL1A1-202ENST00000463440 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 FAM155AB1AL88 458 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-202ENST00000463440 UBE2Q2LH0YL09 131 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 HHIPL2Q6UWX4 724 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 MOB2Q70IA6 237 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
COL1A1-202ENST00000463440 ZDHHC15Q96MV8 337 aa20.03■□□□□ 0.8
COL1A1-202ENST00000463440 CHMP4BQ9H444 224 aaKnown RBP20.03■□□□□ 0.8
COL1A1-202ENST00000463440 LDHBP07195 334 aaKnown RBP20.02■□□□□ 0.8
COL1A1-202ENST00000463440 SLC10A3P09131 477 aa20.02■□□□□ 0.8
COL1A1-202ENST00000463440 TNNI2P48788 182 aa20.02■□□□□ 0.8
COL1A1-202ENST00000463440 RASA3Q14644 834 aa20.02■□□□□ 0.8
COL1A1-202ENST00000463440 TMOD2Q9NZR1 351 aa20.02■□□□□ 0.8
COL1A1-202ENST00000463440 COG6Q9Y2V7 657 aa20.02■□□□□ 0.8
COL1A1-202ENST00000463440 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
COL1A1-202ENST00000463440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.8
COL1A1-202ENST00000463440 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.79
COL1A1-202ENST00000463440 PPP1R12BO60237 982 aaPredicted RBP20.01■□□□□ 0.79
COL1A1-202ENST00000463440 PRDX5P30044 214 aa20.01■□□□□ 0.79
COL1A1-202ENST00000463440 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
COL1A1-202ENST00000463440 PRKG1Q13976 671 aa20.01■□□□□ 0.79
COL1A1-202ENST00000463440 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
COL1A1-202ENST00000463440 TCP10L2B9ZVM9 353 aa20■□□□□ 0.79
COL1A1-202ENST00000463440 COL13A1Q5TAT6 717 aaPredicted RBP20■□□□□ 0.79
COL1A1-202ENST00000463440 RASAL3Q86YV0 1011 aa20■□□□□ 0.79
COL1A1-202ENST00000463440 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
COL1A1-202ENST00000463440 CA12O43570 354 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 KIF23Q02241 960 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-202ENST00000463440 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 TNNI3KQ59H18 835 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 NBPF12Q5TAG4 269 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-202ENST00000463440 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-202ENST00000463440 APOBEC3HQ6NTF7 200 aaKnown RBP19.99■□□□□ 0.79
COL1A1-202ENST00000463440 ZIC5Q96T25 663 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 PRDM10Q9NQV6 1147 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 FPGT-TNNI3KV9GXZ4 949 aa19.99■□□□□ 0.79
COL1A1-202ENST00000463440 UQCRFS1P1P0C7P4 283 aa19.98■□□□□ 0.79
COL1A1-202ENST00000463440 HSPA8P11142 646 aaKnown RBP19.98■□□□□ 0.79
COL1A1-202ENST00000463440 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
COL1A1-202ENST00000463440 ABCF2Q9UG63 623 aa19.98■□□□□ 0.79
COL1A1-202ENST00000463440 ARID4AP29374 1257 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-202ENST00000463440 LBX1P52954 281 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 DIXDC1Q155Q3 683 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 MAP3K11Q16584 847 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 LDLRAD1Q5T700 205 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 FKBP1CQ5VVH2 108 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 DZIP1Q86YF9 867 aaKnown RBP19.97■□□□□ 0.79
COL1A1-202ENST00000463440 RPAP2Q8IXW5 612 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-202ENST00000463440 REM2Q8IYK8 340 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-202ENST00000463440 DAGLAQ9Y4D2 1042 aa19.97■□□□□ 0.79
COL1A1-202ENST00000463440 SSC5DA1L4H1 1573 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 HMMRO75330 724 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 IREB2P48200 963 aaKnown RBP19.96■□□□□ 0.79
COL1A1-202ENST00000463440 CACNB3P54284 484 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 HSP90AB4PQ58FF6 505 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 CCDC158Q5M9N0 1113 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 ERC1Q8IUD2 1116 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 SLF2Q8IX21 1173 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 SPATA5Q8NB90 893 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 TMEM39BQ9GZU3 492 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 HMG20BQ9P0W2 317 aa19.96■□□□□ 0.79
COL1A1-202ENST00000463440 UNCXA6NJT0 531 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 TTC39AQ5SRH9 613 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 FAM83AQ86UY5 434 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 TEPSINQ96N21 525 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 FZD1Q9UP38 647 aa19.95■□□□□ 0.78
COL1A1-202ENST00000463440 C20orf194Q5TEA3 1177 aa19.94■□□□□ 0.78
COL1A1-202ENST00000463440 SLC10A4Q96EP9 437 aa19.94■□□□□ 0.78
COL1A1-202ENST00000463440 CSRNP1Q96S65 589 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms