RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 PANK2Q9BZ23 570 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 TFCP2L1Q9NZI6 479 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
VAPB-203ENST00000463370 MYH7P12883 1935 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 PRC1O43663 620 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 TACC3Q9Y6A5 838 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 PRR5LQ6MZQ0 368 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 CNBD1Q8NA66 436 aa15.14■□□□□ 0.01
VAPB-203ENST00000463370 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
VAPB-203ENST00000463370 GSG1L2A8MUP6 293 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 FIBPO43427 364 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 RAB11FIP4Q86YS3 637 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 IFNL3Q8IZI9 196 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 NCOA7Q8NI08 942 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 SMARCC2Q8TAQ2 1214 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 ZNF384Q8TF68 577 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 NEDD4P46934 1319 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 PATL2C9JE40 543 aaKnown RBP15.13■□□□□ 0.01
VAPB-203ENST00000463370 MCM5P33992 734 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 CAVIN4Q5BKX8 364 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
VAPB-203ENST00000463370 L1TD1Q5T7N2 865 aaKnown RBP15.12■□□□□ 0.01
VAPB-203ENST00000463370 FBXL16Q8N461 479 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 TMEM87AQ8NBN3 555 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 DOCK2Q92608 1830 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 GOLGB1Q14789 3259 aaKnown RBP15.12■□□□□ 0.01
VAPB-203ENST00000463370 PTPDC1A2A3K4 754 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 PDCP20941 246 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 CYP7A1P22680 504 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 CTDSPL2Q05D32 466 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 SLC27A3Q5K4L6 730 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
VAPB-203ENST00000463370 GRPEL1Q9HAV7 217 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 GNL3LQ9NVN8 582 aaKnown RBP15.12■□□□□ 0.01
VAPB-203ENST00000463370 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
VAPB-203ENST00000463370 BRWD3Q6RI45 1802 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 FOSBP53539 338 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 EVCP57679 992 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 TXNRD1Q16881 649 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 ZNF274Q96GC6 653 aaPredicted RBP15.11■□□□□ 0.01
VAPB-203ENST00000463370 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 HPS5Q9UPZ3 1129 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 SLC4A4Q9Y6R1 1079 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 B4E1Z4 1266 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 ALX1Q15699 326 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 NAPBQ9H115 298 aa15.11■□□□□ 0.01
VAPB-203ENST00000463370 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 IRS2Q9Y4H2 1338 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 KLF18A0A0U1RQI7 1052 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 DDR1Q08345 913 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
VAPB-203ENST00000463370 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 PNPLA7Q6ZV29 1317 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 MBD3O95983 291 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 MRE11P49959 708 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 ZNF445P59923 1031 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 GRAPQ13588 217 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
VAPB-203ENST00000463370 GRAPLQ8TC17 118 aaPredicted RBP15.1■□□□□ 0.01
VAPB-203ENST00000463370 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
VAPB-203ENST00000463370 UBR3Q6ZT12 1888 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 SERPINB2P05120 415 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
VAPB-203ENST00000463370 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
VAPB-203ENST00000463370 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
VAPB-203ENST00000463370 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 SYCE3A1L190 88 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 GOLGA8BA8MQT2 603 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 FDPSP14324 419 aaKnown RBP15.09■□□□□ 0.01
VAPB-203ENST00000463370 TRDNQ13061 729 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 ZNF827Q17R98 1081 aa15.09■□□□□ 0.01
VAPB-203ENST00000463370 TDO2P48775 406 aa15.08■□□□□ 0
VAPB-203ENST00000463370 CHAF1AQ13111 956 aaPredicted RBP15.08■□□□□ 0
VAPB-203ENST00000463370 FAM184AQ8NB25 1140 aa15.08■□□□□ 0
VAPB-203ENST00000463370 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
VAPB-203ENST00000463370 PRDX5P30044 214 aa15.07■□□□□ 0
VAPB-203ENST00000463370 RESTQ13127 1097 aa15.07■□□□□ 0
VAPB-203ENST00000463370 MAGEB6P1A0A0J9YX57 407 aa15.07■□□□□ 0
VAPB-203ENST00000463370 SH2B2O14492 632 aaPredicted RBP15.07■□□□□ 0
VAPB-203ENST00000463370 RXRAP19793 462 aa15.07■□□□□ 0
VAPB-203ENST00000463370 CRY2Q49AN0 593 aa15.07■□□□□ 0
VAPB-203ENST00000463370 TTC6Q86TZ1 520 aa15.07■□□□□ 0
VAPB-203ENST00000463370 TFIP11Q9UBB9 837 aaKnown RBP15.07■□□□□ 0
VAPB-203ENST00000463370 H3BQV1 296 aa15.06■□□□□ 0
VAPB-203ENST00000463370 KDM4AO75164 1064 aa15.06■□□□□ 0
VAPB-203ENST00000463370 GNAT2P19087 354 aa15.06■□□□□ 0
VAPB-203ENST00000463370 RBM6P78332 1123 aaKnown RBP15.06■□□□□ 0
VAPB-203ENST00000463370 GUCY1B3Q02153 619 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms