RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 SYT9Q86SS6 491 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 CPLX3Q8WVH0 158 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
VRK2-208ENST00000463222 UBE2OQ9C0C9 1292 aaKnown RBP6.82□□□□□ -1.32
VRK2-208ENST00000463222 KCNQ5Q9NR82 932 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
VRK2-208ENST00000463222 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
VRK2-208ENST00000463222 C2CD2LO14523 706 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 CPB1P15086 417 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 EIF2AK2P19525 551 aaKnown RBP6.81□□□□□ -1.32
VRK2-208ENST00000463222 MX2P20592 715 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 SOX9P48436 509 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 APOBRQ0VD83 1088 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 XP32Q5T750 250 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 RASIP1Q5U651 963 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 ADAMTSL4Q6UY14 1074 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 BNC2Q6ZN30 1099 aaPredicted RBP6.81□□□□□ -1.32
VRK2-208ENST00000463222 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
VRK2-208ENST00000463222 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 TMEM39AQ9NV64 488 aa6.81□□□□□ -1.32
VRK2-208ENST00000463222 OIP5O43482 229 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 F13A1P00488 732 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 MAP2K3P46734 347 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 PCBP4P57723 403 aaKnown RBP6.8□□□□□ -1.32
VRK2-208ENST00000463222 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 RPS26P11Q5JNZ5 115 aaPredicted RBP6.8□□□□□ -1.32
VRK2-208ENST00000463222 CCDC81Q6ZN84 652 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 RBSNQ9H1K0 784 aa6.8□□□□□ -1.32
VRK2-208ENST00000463222 CDK11AQ9UQ88 783 aaPredicted RBP6.8□□□□□ -1.32
VRK2-208ENST00000463222 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
VRK2-208ENST00000463222 BMP6P22004 513 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 FAM196AQ6ZSG2 479 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 STK35Q8TDR2 534 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 PLD4Q96BZ4 506 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 LACRTQ9GZZ8 138 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 PPT2Q9UMR5 302 aa6.79□□□□□ -1.32
VRK2-208ENST00000463222 ANKRD62A6NC57 917 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 BMP4P12644 408 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 LMNB1P20700 586 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 MCM4P33991 863 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 SEPT6Q14141 434 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 PERM1Q5SV97 790 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 SDE2Q6IQ49 451 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 ZNF746Q6NUN9 644 aaPredicted RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 TRIM42Q8IWZ5 723 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 GRIN3AQ8TCU5 1115 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 MRFAP1L1Q96HT8 127 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 SH2B1Q9NRF2 756 aaPredicted RBP6.78□□□□□ -1.32
VRK2-208ENST00000463222 TBX22Q9Y458 520 aa6.78□□□□□ -1.32
VRK2-208ENST00000463222 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
VRK2-208ENST00000463222 KLF4O43474 513 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 SERINC3Q13530 473 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 COL9A2Q14055 689 aaPredicted RBP6.77□□□□□ -1.33
VRK2-208ENST00000463222 PCSK7Q16549 785 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 ZNF468Q5VIY5 522 aaPredicted RBP6.77□□□□□ -1.33
VRK2-208ENST00000463222 FBXW10Q5XX13 1052 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 TRIM55Q9BYV6 548 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 SMG9Q9H0W8 520 aaKnown RBP6.77□□□□□ -1.33
VRK2-208ENST00000463222 MIR1-1HGQ9H1L0 117 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 KLF15Q9UIH9 416 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 STRIP2Q9ULQ0 834 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 TRIM33Q9UPN9 1127 aa6.77□□□□□ -1.33
VRK2-208ENST00000463222 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
VRK2-208ENST00000463222 SIN3BO75182 1162 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 NME2P22392 152 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 NFE2L2Q16236 605 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 ELMSAN1Q6PJG2 1045 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 GATAD2BQ8WXI9 593 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 SHDQ96IW2 340 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 SLC6A14Q9UN76 642 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 SOX13Q9UN79 622 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 R3HCC1Q9Y3T6 440 aaKnown RBP6.76□□□□□ -1.33
VRK2-208ENST00000463222 SAMM50Q9Y512 469 aa6.76□□□□□ -1.33
VRK2-208ENST00000463222 ROBO2Q9HCK4 1378 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 SBNO2Q9Y2G9 1366 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 FAM221AA4D161 298 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 B3GALT4O96024 378 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms