RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
VARS-221ENST00000463184 CRHR2Q13324 411 aa24.91■■□□□ 1.58
VARS-221ENST00000463184 RABL6Q3YEC7 729 aaPredicted RBP24.91■■□□□ 1.58
VARS-221ENST00000463184 OPTNQ96CV9 577 aa24.91■■□□□ 1.58
VARS-221ENST00000463184 TEPSINQ96N21 525 aa24.91■■□□□ 1.58
VARS-221ENST00000463184 PTPN18Q99952 460 aa24.91■■□□□ 1.58
VARS-221ENST00000463184 BICC1Q9H694 974 aaKnown RBP24.91■■□□□ 1.58
VARS-221ENST00000463184 ELP3Q9H9T3 547 aa24.91■■□□□ 1.58
VARS-221ENST00000463184 TCP10L2B9ZVM9 353 aa24.9■■□□□ 1.58
VARS-221ENST00000463184 HDLBPQ00341 1268 aaKnown RBP24.9■■□□□ 1.58
VARS-221ENST00000463184 CAVIN4Q5BKX8 364 aa24.9■■□□□ 1.58
VARS-221ENST00000463184 TBC1D22AQ8WUA7 517 aa24.9■■□□□ 1.58
VARS-221ENST00000463184 MS4A4AQ96JQ5 239 aa24.89■■□□□ 1.58
VARS-221ENST00000463184 PTPN22Q9Y2R2 807 aa24.89■■□□□ 1.58
VARS-221ENST00000463184 FRAT2O75474 233 aaPredicted RBP24.88■■□□□ 1.57
VARS-221ENST00000463184 MAP3K9P80192 1104 aa24.88■■□□□ 1.57
VARS-221ENST00000463184 SP3Q02447 781 aa24.88■■□□□ 1.57
VARS-221ENST00000463184 LRRC24Q50LG9 513 aa24.88■■□□□ 1.57
VARS-221ENST00000463184 METTL24Q5JXM2 366 aa24.88■■□□□ 1.57
VARS-221ENST00000463184 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.88■■□□□ 1.57
VARS-221ENST00000463184 TMEM39BQ9GZU3 492 aa24.88■■□□□ 1.57
VARS-221ENST00000463184 PDE8BO95263 885 aa24.87■■□□□ 1.57
VARS-221ENST00000463184 CHAF1AQ13111 956 aaPredicted RBP24.87■■□□□ 1.57
VARS-221ENST00000463184 ANKRD44Q8N8A2 993 aa24.87■■□□□ 1.57
VARS-221ENST00000463184 CD99L2Q8TCZ2 262 aa24.87■■□□□ 1.57
VARS-221ENST00000463184 MRIQ9BWK5 157 aa24.87■■□□□ 1.57
VARS-221ENST00000463184 EFCC1Q9HA90 598 aa24.87■■□□□ 1.57
VARS-221ENST00000463184 IQSEC3Q9UPP2 1182 aaPredicted RBP24.87■■□□□ 1.57
VARS-221ENST00000463184 GTF2A2P52657 109 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 GRIK5Q16478 980 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 CDAN1Q8IWY9 1227 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 MRPL50Q8N5N7 158 aaKnown RBP24.86■■□□□ 1.57
VARS-221ENST00000463184 VGLL2Q8N8G2 317 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.86■■□□□ 1.57
VARS-221ENST00000463184 TEKT1Q969V4 418 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 CSADQ9Y600 493 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 ARAP2Q8WZ64 1704 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 PTPRCP08575 1304 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 ZNF521Q96K83 1311 aa24.86■■□□□ 1.57
VARS-221ENST00000463184 HTTP42858 3142 aa24.85■■□□□ 1.57
VARS-221ENST00000463184 VGLL4Q14135 290 aa24.85■■□□□ 1.57
VARS-221ENST00000463184 SUGT1Q9Y2Z0 365 aa24.84■■□□□ 1.57
VARS-221ENST00000463184 OTOFQ9HC10 1997 aa24.84■■□□□ 1.57
VARS-221ENST00000463184 BCAMP50895 628 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 ARHGEF6Q15052 776 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 CNKSR2Q8WXI2 1034 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 BRI3BPQ8WY22 251 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 ZDHHC15Q96MV8 337 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 ZFYVE28Q9HCC9 887 aa24.83■■□□□ 1.57
VARS-221ENST00000463184 CCL15-CCL14A0A0B4J2E2 113 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 CCL15Q16663 113 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 FAM83AQ86UY5 434 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 ARMC5Q96C12 935 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 TMOD2Q9NZR1 351 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 MAST3O60307 1309 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 KIF16BQ96L93 1317 aa24.82■■□□□ 1.56
VARS-221ENST00000463184 POTEFA5A3E0 1075 aa24.81■■□□□ 1.56
VARS-221ENST00000463184 IFIT1P09914 478 aaKnown RBP24.81■■□□□ 1.56
VARS-221ENST00000463184 TAF1CQ15572 869 aaPredicted RBP24.81■■□□□ 1.56
VARS-221ENST00000463184 FKBP1CQ5VVH2 108 aa24.81■■□□□ 1.56
VARS-221ENST00000463184 HOOK2Q96ED9 719 aa24.81■■□□□ 1.56
VARS-221ENST00000463184 USP44Q9H0E7 712 aa24.81■■□□□ 1.56
VARS-221ENST00000463184 CACNB3P54284 484 aa24.8■■□□□ 1.56
VARS-221ENST00000463184 PUM3Q15397 648 aaKnown RBP24.8■■□□□ 1.56
VARS-221ENST00000463184 KLHDC4Q8TBB5 520 aa24.8■■□□□ 1.56
VARS-221ENST00000463184 OTUD5Q96G74 571 aa24.8■■□□□ 1.56
VARS-221ENST00000463184 CENPFP49454 3210 aa24.79■■□□□ 1.56
VARS-221ENST00000463184 SPDYE5A6NIY4 337 aa24.79■■□□□ 1.56
VARS-221ENST00000463184 FGFR2P21802 821 aa24.79■■□□□ 1.56
VARS-221ENST00000463184 APOBEC3HQ6NTF7 200 aaKnown RBP24.79■■□□□ 1.56
VARS-221ENST00000463184 HHIPL2Q6UWX4 724 aa24.79■■□□□ 1.56
VARS-221ENST00000463184 E9PSI1 815 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 WDHD1O75717 1129 aaPredicted RBP24.78■■□□□ 1.56
VARS-221ENST00000463184 CAP1Q01518 475 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 ERO1BQ86YB8 467 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 FAM43AQ8N2R8 423 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 SSH1Q8WYL5 1049 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 GCC1Q96CN9 775 aa24.78■■□□□ 1.56
VARS-221ENST00000463184 CETPP11597 493 aa24.77■■□□□ 1.56
VARS-221ENST00000463184 WRNIP1Q96S55 665 aa24.77■■□□□ 1.56
VARS-221ENST00000463184 ZCCHC17Q9NP64 241 aaKnown RBP24.77■■□□□ 1.56
VARS-221ENST00000463184 SNCAIPQ9Y6H5 919 aa24.77■■□□□ 1.56
VARS-221ENST00000463184 MKI67P46013 3256 aaKnown RBP24.77■■□□□ 1.56
VARS-221ENST00000463184 EYA2O00167 538 aa24.76■■□□□ 1.55
VARS-221ENST00000463184 DCAF15Q66K64 600 aa24.76■■□□□ 1.55
VARS-221ENST00000463184 WDR66Q8TBY9 1149 aa24.76■■□□□ 1.55
VARS-221ENST00000463184 CCER2I3L3R5 266 aa24.75■■□□□ 1.55
VARS-221ENST00000463184 SLC5A1P13866 664 aa24.75■■□□□ 1.55
VARS-221ENST00000463184 RFX5P48382 616 aaPredicted RBP24.75■■□□□ 1.55
VARS-221ENST00000463184 NBPF11Q86T75 865 aa24.75■■□□□ 1.55
VARS-221ENST00000463184 LPIN2Q92539 896 aa24.75■■□□□ 1.55
VARS-221ENST00000463184 TMEM106CQ9BVX2 250 aa24.75■■□□□ 1.55
VARS-221ENST00000463184 SNAPC2Q13487 334 aa24.74■■□□□ 1.55
VARS-221ENST00000463184 ZKSCAN4Q969J2 545 aaPredicted RBP24.74■■□□□ 1.55
VARS-221ENST00000463184 ZNF333Q96JL9 665 aa24.74■■□□□ 1.55
VARS-221ENST00000463184 RPAP1Q9BWH6 1393 aaPredicted RBP24.74■■□□□ 1.55
VARS-221ENST00000463184 KIAA0100Q14667 2235 aaKnown RBP24.73■■□□□ 1.55
VARS-221ENST00000463184 IRF6O14896 467 aa24.73■■□□□ 1.55
VARS-221ENST00000463184 TLR2O60603 784 aa24.73■■□□□ 1.55
VARS-221ENST00000463184 PPIL2Q13356 520 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms