RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 HHIPQ96QV1 700 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 GGNBP2Q9H3C7 697 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.75□□□□□ -1.17
USH2A-203ENST00000463147 CYP11A1P05108 521 aa7.75□□□□□ -1.17
USH2A-203ENST00000463147 NFXL1Q6ZNB6 911 aa7.75□□□□□ -1.17
USH2A-203ENST00000463147 DDX54Q8TDD1 881 aaKnown RBP7.75□□□□□ -1.17
USH2A-203ENST00000463147 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
USH2A-203ENST00000463147 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
USH2A-203ENST00000463147 ADH5P11766 374 aa7.74□□□□□ -1.17
USH2A-203ENST00000463147 ADMP35318 185 aa7.74□□□□□ -1.17
USH2A-203ENST00000463147 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
USH2A-203ENST00000463147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.74□□□□□ -1.17
USH2A-203ENST00000463147 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
USH2A-203ENST00000463147 FAM170BA6NMN3 283 aa7.73□□□□□ -1.17
USH2A-203ENST00000463147 DLGAP3O95886 979 aa7.73□□□□□ -1.17
USH2A-203ENST00000463147 GATA6Q92908 595 aa7.73□□□□□ -1.17
USH2A-203ENST00000463147 ZC3H7BQ9UGR2 993 aaKnown RBP7.73□□□□□ -1.17
USH2A-203ENST00000463147 SEPT3Q9UH03 358 aa7.73□□□□□ -1.17
USH2A-203ENST00000463147 EREGO14944 169 aa7.72□□□□□ -1.17
USH2A-203ENST00000463147 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
USH2A-203ENST00000463147 LRRC4CQ9HCJ2 640 aa7.72□□□□□ -1.17
USH2A-203ENST00000463147 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
USH2A-203ENST00000463147 EIF1AXP47813 144 aaKnown RBP7.71□□□□□ -1.18
USH2A-203ENST00000463147 CYP27C1Q4G0S4 372 aa7.71□□□□□ -1.18
USH2A-203ENST00000463147 SHISA5Q8N114 240 aa7.71□□□□□ -1.18
USH2A-203ENST00000463147 PBXIP1Q96AQ6 731 aa7.71□□□□□ -1.18
USH2A-203ENST00000463147 ACTL7BQ9Y614 415 aa7.71□□□□□ -1.18
USH2A-203ENST00000463147 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 NFICP08651 508 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 PLCL1Q15111 1095 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 POU4F3Q15319 338 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 CLEC4MQ9H2X3 399 aaPredicted RBP7.7□□□□□ -1.18
USH2A-203ENST00000463147 RAD18Q9NS91 495 aa7.7□□□□□ -1.18
USH2A-203ENST00000463147 A6NHS1 94 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 DBX1A6NMT0 343 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 PAPLNO95428 1278 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 RAB6AP20340 208 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 AAMPQ13685 434 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 PKN1Q16512 942 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 ZNF765Q7L2R6 523 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 DYMQ7RTS9 669 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
USH2A-203ENST00000463147 ARID3AQ99856 593 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 KRTAP4-9Q9BYQ8 210 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 NRSN2Q9GZP1 204 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 SEMA6CQ9H3T2 930 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 POLIQ9UNA4 740 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
USH2A-203ENST00000463147 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
USH2A-203ENST00000463147 MPSTP25325 297 aa7.68□□□□□ -1.18
USH2A-203ENST00000463147 MAOBP27338 520 aa7.68□□□□□ -1.18
USH2A-203ENST00000463147 HNRNPUQ00839 825 aaKnown RBP eCLIP7.68□□□□□ -1.18
USH2A-203ENST00000463147 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
USH2A-203ENST00000463147 OGFOD3Q6PK18 319 aa7.68□□□□□ -1.18
USH2A-203ENST00000463147 ATG4DQ86TL0 474 aaPredicted RBP7.68□□□□□ -1.18
USH2A-203ENST00000463147 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
USH2A-203ENST00000463147 FAM13AO94988 1023 aa7.67□□□□□ -1.18
USH2A-203ENST00000463147 ASPAP45381 313 aa7.67□□□□□ -1.18
USH2A-203ENST00000463147 CORO1BQ9BR76 489 aa7.67□□□□□ -1.18
USH2A-203ENST00000463147 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
USH2A-203ENST00000463147 A0A096LPE4 126 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 A0A1W2PPZ6 126 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 NPR3P17342 541 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 TRIM26Q12899 539 aaPredicted RBP7.66□□□□□ -1.18
USH2A-203ENST00000463147 ZNF792Q3KQV3 632 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 PEAR1Q5VY43 1037 aaPredicted RBP7.66□□□□□ -1.18
USH2A-203ENST00000463147 PODXL2Q9NZ53 605 aa7.66□□□□□ -1.18
USH2A-203ENST00000463147 GTF3C2Q8WUA4 911 aaPredicted RBP7.65□□□□□ -1.18
USH2A-203ENST00000463147 TMEM40Q8WWA1 233 aa7.65□□□□□ -1.18
USH2A-203ENST00000463147 ZFYVE28Q9HCC9 887 aa7.65□□□□□ -1.18
USH2A-203ENST00000463147 AP4E1Q9UPM8 1137 aa7.65□□□□□ -1.18
USH2A-203ENST00000463147 FBLN7Q53RD9 439 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 SEZ6L2Q6UXD5 910 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 CCNJLQ8IV13 435 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 SLC38A3Q99624 504 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 C1GALT1Q9NS00 363 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 FAM105AQ9NUU6 356 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 SLAIN2Q9P270 581 aa7.64□□□□□ -1.19
USH2A-203ENST00000463147 FOXD3Q9UJU5 478 aaPredicted RBP7.64□□□□□ -1.19
USH2A-203ENST00000463147 NEFLP07196 543 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 SF3B2Q13435 895 aaKnown RBP7.63□□□□□ -1.19
USH2A-203ENST00000463147 KRTAP19-4Q3LI73 84 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 ZNF648Q5T619 568 aaPredicted RBP7.63□□□□□ -1.19
USH2A-203ENST00000463147 KSR1Q8IVT5 923 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 NETO1Q8TDF5 533 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 VAV3Q9UKW4 847 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 DAGLAQ9Y4D2 1042 aa7.63□□□□□ -1.19
USH2A-203ENST00000463147 FUT4P22083 530 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 GALNT12Q8IXK2 581 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 BHLHE22Q8NFJ8 381 aaPredicted RBP7.62□□□□□ -1.19
USH2A-203ENST00000463147 KRTAP4-2Q9BYR5 136 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 LIN7BQ9HAP6 207 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 MKNK2Q9HBH9 465 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
USH2A-203ENST00000463147 METTL12A8MUP2 240 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms