RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 MYL6BP14649 208 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 NT5C2P49902 561 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 CASP7P55210 303 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 PTPN12Q05209 780 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 KCNH2Q12809 1159 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 AIMP1Q12904 312 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 MTMR2Q13614 643 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 VPS72Q15906 364 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 PTPRNQ16849 979 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 CSPP1Q1MSJ5 1256 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 CCDC57Q2TAC2 916 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 CWF19L2Q2TBE0 894 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 TSGA10IPQ3SY00 556 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 TNNI3KQ59H18 835 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 L1TD1Q5T7N2 865 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 AACSQ86V21 672 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 UNC5CLQ8IV45 518 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 DDX54Q8TDD1 881 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 PIGBQ92521 554 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 BAP1Q92560 729 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 KCNB2Q92953 911 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 RILPL2Q969X0 211 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 KIFC2Q96AC6 838 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 TRIM47Q96LD4 638 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 KIF2CQ99661 725 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 UNC93B1Q9H1C4 597 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 ALDH8A1Q9H2A2 487 aaPredicted RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 ANO2Q9NQ90 1003 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 WASF2Q9Y6W5 498 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 FPGT-TNNI3KV9GXZ4 949 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 NUP188Q5SRE5 1749 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.96□□□□□ -1.62
ERCC4-203ENST00000462862 SH3TC1Q8TE82 1336 aa4.96□□□□□ -1.62
ERCC4-203ENST00000462862 SPDYE5A6NIY4 337 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 EYA2O00167 538 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 SMARCA5O60264 1052 aaPredicted RBP4.95□□□□□ -1.62
ERCC4-203ENST00000462862 CSF1RP07333 972 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 RFX5P48382 616 aaPredicted RBP4.95□□□□□ -1.62
ERCC4-203ENST00000462862 PIP4K2BP78356 416 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 CUL4AQ13619 759 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 RAB3GAP1Q15042 981 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 TTF1Q15361 905 aaPredicted RBP4.95□□□□□ -1.62
ERCC4-203ENST00000462862 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 VPS53Q5VIR6 699 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 ZSCAN25Q6NSZ9 544 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 UBE3BQ7Z3V4 1068 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 HAUS7Q99871 368 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 IL1RAPL2Q9NP60 686 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 CEP126Q9P2H0 1117 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 KIF3AQ9Y496 699 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 RREB1Q92766 1687 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 MROH5Q6ZUA9 1318 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 CNTNAP4Q9C0A0 1308 aa4.95□□□□□ -1.62
ERCC4-203ENST00000462862 MED23Q9ULK4 1368 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 KAT6BQ8WYB5 2073 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 PRAMEF22A3QJZ6 481 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 APBB1O00213 710 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 TERTO14746 1132 aaKnown RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CAPN5O15484 640 aaPredicted RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 PDE8AO60658 829 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 ANXA1P04083 346 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CYP19A1P11511 503 aaPredicted RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 PDCP20941 246 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 MCM4P33991 863 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 HSPA1LP34931 641 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 IFIT5Q13325 482 aaKnown RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 DIXDC1Q155Q3 683 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CCDC158Q5M9N0 1113 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 NBPF14Q5TI25 921 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 DESI1Q6ICB0 168 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 NBPF10Q6P3W6 841 aaKnown RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 C16orf71Q8IYS4 520 aaPredicted RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 FNBP4Q8N3X1 1017 aaPredicted RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 NBPF15Q8N660 670 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 KBTBD3Q8NAB2 608 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 OTUD7AQ8TE49 926 aaPredicted RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 FSD1Q9BTV5 496 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 HELLSQ9NRZ9 838 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CCDC87Q9NVE4 849 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CTNNA3Q9UI47 895 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 LIMCH1Q9UPQ0 1083 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 ZNF609O15014 1411 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 TOGARAM1Q9Y4F4 1720 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 CCDC171Q6TFL3 1326 aa4.94□□□□□ -1.62
ERCC4-203ENST00000462862 WDR33Q9C0J8 1336 aaKnown RBP4.94□□□□□ -1.62
ERCC4-203ENST00000462862 RPAP1Q9BWH6 1393 aaPredicted RBP4.93□□□□□ -1.62
ERCC4-203ENST00000462862 AFDNP55196 1824 aaKnown RBP4.93□□□□□ -1.62
ERCC4-203ENST00000462862 LOC102724428A0A0B4J2F2 783 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 ANKRD18BA2A2Z9 1011 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 TRIM66O15016 1216 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 PTCD1O75127 700 aaKnown RBP4.93□□□□□ -1.62
ERCC4-203ENST00000462862 SASH1O94885 1247 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 A1BGP04217 495 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 UQCRFS1P1P0C7P4 283 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 CTHP32929 405 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 GJA5P36382 358 aa4.93□□□□□ -1.62
ERCC4-203ENST00000462862 NEK4P51957 841 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms