RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 DZIP1LQ8IYY4 767 aaKnown RBP14.14□□□□□ -0.15
PTPN7-204ENST00000462815 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
PTPN7-204ENST00000462815 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
PTPN7-204ENST00000462815 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
PTPN7-204ENST00000462815 TRIM17Q9Y577 477 aa14.14□□□□□ -0.15
PTPN7-204ENST00000462815 POTEFA5A3E0 1075 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 CRKP46108 304 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPN7-204ENST00000462815 CD99L2Q8TCZ2 262 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 TMEM39BQ9GZU3 492 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 C9orf78Q9NZ63 289 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-204ENST00000462815 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 MROH5Q6ZUA9 1318 aa14.13□□□□□ -0.15
PTPN7-204ENST00000462815 RBM5P52756 815 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPN7-204ENST00000462815 TNFAIP1Q13829 316 aa14.12□□□□□ -0.15
PTPN7-204ENST00000462815 TAF7LQ5H9L4 462 aa14.12□□□□□ -0.15
PTPN7-204ENST00000462815 BRI3BPQ8WY22 251 aa14.12□□□□□ -0.15
PTPN7-204ENST00000462815 ARMC5Q96C12 935 aa14.12□□□□□ -0.15
PTPN7-204ENST00000462815 BICC1Q9H694 974 aaKnown RBP14.12□□□□□ -0.15
PTPN7-204ENST00000462815 ELP3Q9H9T3 547 aa14.12□□□□□ -0.15
PTPN7-204ENST00000462815 VGLL4Q14135 290 aa14.11□□□□□ -0.15
PTPN7-204ENST00000462815 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
PTPN7-204ENST00000462815 MRPL50Q8N5N7 158 aaKnown RBP14.11□□□□□ -0.15
PTPN7-204ENST00000462815 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
PTPN7-204ENST00000462815 TCP10L2B9ZVM9 353 aa14.1□□□□□ -0.15
PTPN7-204ENST00000462815 FGFR2P21802 821 aa14.1□□□□□ -0.15
PTPN7-204ENST00000462815 HDLBPQ00341 1268 aaKnown RBP14.1□□□□□ -0.15
PTPN7-204ENST00000462815 ERO1AQ96HE7 468 aa14.1□□□□□ -0.15
PTPN7-204ENST00000462815 IQSEC3Q9UPP2 1182 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-204ENST00000462815 PDE8BO95263 885 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 CACNB3P54284 484 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 SP3Q02447 781 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 INTS3Q68E01 1043 aaKnown RBP14.09□□□□□ -0.15
PTPN7-204ENST00000462815 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
PTPN7-204ENST00000462815 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 KLHDC4Q8TBB5 520 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 KIF16BQ96L93 1317 aa14.09□□□□□ -0.15
PTPN7-204ENST00000462815 RPAP1Q9BWH6 1393 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-204ENST00000462815 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 ANP32CO43423 234 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-204ENST00000462815 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 OTUD7BQ6GQQ9 843 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 ZDHHC15Q96MV8 337 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 MRIQ9BWK5 157 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 EFCC1Q9HA90 598 aa14.08□□□□□ -0.16
PTPN7-204ENST00000462815 BCAMP50895 628 aa14.07□□□□□ -0.16
PTPN7-204ENST00000462815 FAM83AQ86UY5 434 aa14.07□□□□□ -0.16
PTPN7-204ENST00000462815 TBC1D22AQ8WUA7 517 aa14.07□□□□□ -0.16
PTPN7-204ENST00000462815 ZNF333Q96JL9 665 aa14.07□□□□□ -0.16
PTPN7-204ENST00000462815 RANBP2P49792 3224 aaKnown RBP14.07□□□□□ -0.16
PTPN7-204ENST00000462815 CCL15-CCL14A0A0B4J2E2 113 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 TNNI2P48788 182 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 GTF2A2P52657 109 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 CHAF1AQ13111 956 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-204ENST00000462815 CCL15Q16663 113 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 METTL24Q5JXM2 366 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 TEKT1Q969V4 418 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 PTPRCP08575 1304 aa14.06□□□□□ -0.16
PTPN7-204ENST00000462815 SZT2Q5T011 3432 aa14.05□□□□□ -0.16
PTPN7-204ENST00000462815 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-204ENST00000462815 FAM9BQ8IZU0 186 aa14.05□□□□□ -0.16
PTPN7-204ENST00000462815 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
PTPN7-204ENST00000462815 SUGT1Q9Y2Z0 365 aa14.05□□□□□ -0.16
PTPN7-204ENST00000462815 PTCH2Q9Y6C5 1203 aa14.05□□□□□ -0.16
PTPN7-204ENST00000462815 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 PUM3Q15397 648 aaKnown RBP14.04□□□□□ -0.16
PTPN7-204ENST00000462815 TAF1CQ15572 869 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-204ENST00000462815 CAVIN4Q5BKX8 364 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 HHIPL2Q6UWX4 724 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-204ENST00000462815 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 ZCCHC17Q9NP64 241 aaKnown RBP14.04□□□□□ -0.16
PTPN7-204ENST00000462815 CSADQ9Y600 493 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 ADGRA2Q96PE1 1338 aa14.04□□□□□ -0.16
PTPN7-204ENST00000462815 IRF6O14896 467 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 TLR2O60603 784 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 CTGFP29279 349 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 MOGSQ13724 837 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 VPS37DQ86XT2 251 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 ERO1BQ86YB8 467 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 WRNIP1Q96S55 665 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 ZFYVE28Q9HCC9 887 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 ZNF112Q9UJU3 913 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
PTPN7-204ENST00000462815 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
PTPN7-204ENST00000462815 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
PTPN7-204ENST00000462815 MAST3O60307 1309 aa14.02□□□□□ -0.17
PTPN7-204ENST00000462815 ZNF316A6NFI3 1004 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-204ENST00000462815 EYA2O00167 538 aa14.02□□□□□ -0.17
PTPN7-204ENST00000462815 PPIL2Q13356 520 aa14.02□□□□□ -0.17
PTPN7-204ENST00000462815 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms