RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ATP10AO60312 1499 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 PTPRMP28827 1452 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 CPNE3O75131 537 aaKnown RBP10.47□□□□□ -0.73
UBE4B-204ENST00000462658 KIF4AO95239 1232 aa10.47□□□□□ -0.73
UBE4B-204ENST00000462658 NEFLP07196 543 aa10.47□□□□□ -0.73
UBE4B-204ENST00000462658 PMEPA1Q969W9 287 aa10.47□□□□□ -0.73
UBE4B-204ENST00000462658 SETDB2Q96T68 719 aa10.47□□□□□ -0.73
UBE4B-204ENST00000462658 LATS2Q9NRM7 1088 aa10.47□□□□□ -0.73
UBE4B-204ENST00000462658 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 TRPA1O75762 1119 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 GHRHP01286 108 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 P4HBP07237 508 aaKnown RBP10.46□□□□□ -0.73
UBE4B-204ENST00000462658 FMR1Q06787 632 aaKnown RBP eCLIP10.46□□□□□ -0.73
UBE4B-204ENST00000462658 NPAS4Q8IUM7 802 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 LPIN3Q9BQK8 851 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 ENAMQ9NRM1 1142 aa10.46□□□□□ -0.73
UBE4B-204ENST00000462658 FER1L4A9Z1Z3 1794 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 M0R082 166 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 KIF3BO15066 747 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 HOXB4P17483 251 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-204ENST00000462658 ATP11AP98196 1134 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 ELMSAN1Q6PJG2 1045 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 MICALL1Q8N3F8 863 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 CEP120Q8N960 986 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 ZNF417Q8TAU3 575 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 PLD4Q96BZ4 506 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 SPACA7Q96KW9 195 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 ZNF587Q96SQ5 575 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-204ENST00000462658 SMG9Q9H0W8 520 aaKnown RBP10.45□□□□□ -0.74
UBE4B-204ENST00000462658 WWC3Q9ULE0 1092 aa10.45□□□□□ -0.74
UBE4B-204ENST00000462658 A2MP01023 1474 aa10.44□□□□□ -0.74
UBE4B-204ENST00000462658 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
UBE4B-204ENST00000462658 SNRPNP63162 240 aaKnown RBP10.44□□□□□ -0.74
UBE4B-204ENST00000462658 C20orf204Q6ZNR8 217 aa10.44□□□□□ -0.74
UBE4B-204ENST00000462658 RASSF4Q9H2L5 321 aa10.44□□□□□ -0.74
UBE4B-204ENST00000462658 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-204ENST00000462658 ENOX2Q16206 610 aaKnown RBP10.43□□□□□ -0.74
UBE4B-204ENST00000462658 GALNT12Q8IXK2 581 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 ADAMTS8Q9UP79 889 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 UNC13BO14795 1591 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 AGLP35573 1532 aa10.43□□□□□ -0.74
UBE4B-204ENST00000462658 RGS9O75916 674 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-204ENST00000462658 IRS1P35568 1242 aa10.42□□□□□ -0.74
UBE4B-204ENST00000462658 PEAR1Q5VY43 1037 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-204ENST00000462658 HHIPQ96QV1 700 aa10.42□□□□□ -0.74
UBE4B-204ENST00000462658 RBSNQ9H1K0 784 aa10.42□□□□□ -0.74
UBE4B-204ENST00000462658 NPHS2Q9NP85 383 aa10.42□□□□□ -0.74
UBE4B-204ENST00000462658 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
UBE4B-204ENST00000462658 KANK1Q14678 1352 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 EDN3P14138 238 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 DGKGP49619 791 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 PI16Q6UXB8 463 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 EPS8L3Q8TE67 593 aaKnown RBP10.41□□□□□ -0.74
UBE4B-204ENST00000462658 ZKSCAN3Q9BRR0 538 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
UBE4B-204ENST00000462658 TONSLQ96HA7 1378 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 ADAMTSL4Q6UY14 1074 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 OSMRQ99650 979 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 PBX4Q9BYU1 374 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 FRRS1LQ9P0K9 344 aa10.4□□□□□ -0.74
UBE4B-204ENST00000462658 EIF2AK4Q9P2K8 1649 aaKnown RBP10.4□□□□□ -0.75
UBE4B-204ENST00000462658 CNTNAP5Q8WYK1 1306 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 LMTK3Q96Q04 1460 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 A0A1W2PP55 124 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 NFKBIEO00221 500 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 LILRB5O75023 590 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 TAGLNQ01995 201 aaKnown RBP10.39□□□□□ -0.75
UBE4B-204ENST00000462658 MLECQ14165 292 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 GRIK5Q16478 980 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 GDF6Q6KF10 455 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-204ENST00000462658 GGT6Q6P531 493 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 IQGAP3Q86VI3 1631 aa10.39□□□□□ -0.75
UBE4B-204ENST00000462658 ARID4BQ4LE39 1312 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-204ENST00000462658 C3P01024 1663 aa10.38□□□□□ -0.75
UBE4B-204ENST00000462658 LDHBP07195 334 aaKnown RBP10.38□□□□□ -0.75
UBE4B-204ENST00000462658 AFF1P51825 1210 aaKnown RBP10.38□□□□□ -0.75
UBE4B-204ENST00000462658 EAPPQ56P03 285 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-204ENST00000462658 LACRTQ9GZZ8 138 aa10.38□□□□□ -0.75
UBE4B-204ENST00000462658 DEPDC5O75140 1603 aa10.37□□□□□ -0.75
UBE4B-204ENST00000462658 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-204ENST00000462658 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
UBE4B-204ENST00000462658 POP1Q99575 1024 aaKnown RBP10.37□□□□□ -0.75
UBE4B-204ENST00000462658 RNF19AQ9NV58 838 aa10.37□□□□□ -0.75
UBE4B-204ENST00000462658 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
UBE4B-204ENST00000462658 GADD45BO75293 160 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-204ENST00000462658 SMNDC1O75940 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBE4B-204ENST00000462658 ERCC3P19447 782 aa10.36□□□□□ -0.75
UBE4B-204ENST00000462658 FBXO33Q7Z6M2 555 aa10.36□□□□□ -0.75
UBE4B-204ENST00000462658 TTC9Q92623 222 aa10.36□□□□□ -0.75
UBE4B-204ENST00000462658 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
UBE4B-204ENST00000462658 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
UBE4B-204ENST00000462658 PDE2AO00408 941 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms