RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 ZNF157P51786 506 aaPredicted RBP23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 TEKT1Q969V4 418 aa23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 XAGE2Q96GT9 111 aa23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 TDRD3Q9H7E2 651 aaKnown RBP23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 AOX1Q06278 1338 aa23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 MVPQ14764 893 aaKnown RBP23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 CCDC102AQ96A19 550 aa23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 MRIQ9BWK5 157 aa23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 ZNF70Q9UC06 446 aaPredicted RBP23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 COG6Q9Y2V7 657 aa23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 PPP2R3BQ9Y5P8 575 aa23.33■■□□□ 1.33
SLC6A1-204ENST00000462473 NOGQ13253 232 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 SPDYE2Q495Y8 402 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 GORABQ5T7V8 394 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 MOB2Q70IA6 237 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 BEGAINQ9BUH8 593 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 DDX19BQ9UMR2 479 aa23.32■■□□□ 1.32
SLC6A1-204ENST00000462473 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 ARAP2Q8WZ64 1704 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 UBE2Q2LH0YL09 131 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 FOXN1O15353 648 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 TNFAIP1Q13829 316 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 PRKG1Q13976 671 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 CEP85Q6P2H3 762 aa23.31■■□□□ 1.32
SLC6A1-204ENST00000462473 RASA3Q14644 834 aa23.3■■□□□ 1.32
SLC6A1-204ENST00000462473 HHIPL2Q6UWX4 724 aa23.3■■□□□ 1.32
SLC6A1-204ENST00000462473 ARMC9Q7Z3E5 817 aa23.3■■□□□ 1.32
SLC6A1-204ENST00000462473 FAM155AB1AL88 458 aaPredicted RBP23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 ZBTB22O15209 634 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 LDHBP07195 334 aaKnown RBP23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 PRDX5P30044 214 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 CTCFP49711 727 aaPredicted RBP23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 SUPT20HL1Q3ZLR7 823 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 ZDHHC15Q96MV8 337 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 CHMP4BQ9H444 224 aaKnown RBP23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 PAPPA2Q9BXP8 1791 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 SALL1Q9NSC2 1324 aa23.29■■□□□ 1.32
SLC6A1-204ENST00000462473 TCP10L2B9ZVM9 353 aa23.28■■□□□ 1.32
SLC6A1-204ENST00000462473 RASGRF1Q13972 1273 aa23.28■■□□□ 1.32
SLC6A1-204ENST00000462473 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
SLC6A1-204ENST00000462473 ZIC5Q96T25 663 aa23.28■■□□□ 1.32
SLC6A1-204ENST00000462473 GPR108Q9NPR9 543 aa23.28■■□□□ 1.32
SLC6A1-204ENST00000462473 SLC10A3P09131 477 aa23.27■■□□□ 1.32
SLC6A1-204ENST00000462473 TNNI2P48788 182 aa23.27■■□□□ 1.32
SLC6A1-204ENST00000462473 YTHDC1Q96MU7 727 aaKnown RBP23.27■■□□□ 1.32
SLC6A1-204ENST00000462473 TMOD2Q9NZR1 351 aa23.27■■□□□ 1.32
SLC6A1-204ENST00000462473 ANGEL1Q9UNK9 670 aaKnown RBP23.27■■□□□ 1.32
SLC6A1-204ENST00000462473 ECM29Q5VYK3 1845 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 PPP1R12BO60237 982 aaPredicted RBP23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 PDE3AQ14432 1141 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 TNNI3KQ59H18 835 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 NBPF12Q5TAG4 269 aaPredicted RBP23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 COL13A1Q5TAT6 717 aaPredicted RBP23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 APOBEC3HQ6NTF7 200 aaKnown RBP23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 ABCF2Q9UG63 623 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 FPGT-TNNI3KV9GXZ4 949 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
SLC6A1-204ENST00000462473 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 KIF23Q02241 960 aaPredicted RBP23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 RASAL3Q86YV0 1011 aa23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 ZBTB40Q9NUA8 1239 aa23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 FZD1Q9UP38 647 aa23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 PDS5AQ29RF7 1337 aaKnown RBP23.25■■□□□ 1.31
SLC6A1-204ENST00000462473 CACNB3P54284 484 aa23.24■■□□□ 1.31
SLC6A1-204ENST00000462473 C20orf194Q5TEA3 1177 aa23.24■■□□□ 1.31
SLC6A1-204ENST00000462473 SPTY2D1Q68D10 685 aaPredicted RBP23.24■■□□□ 1.31
SLC6A1-204ENST00000462473 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
SLC6A1-204ENST00000462473 UQCRFS1P1P0C7P4 283 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 LBX1P52954 281 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 CCDC158Q5M9N0 1113 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 HMG20BQ9P0W2 317 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
SLC6A1-204ENST00000462473 HMMRO75330 724 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 MAP3K11Q16584 847 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 TTC39AQ5SRH9 613 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 LDLRAD1Q5T700 205 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 DZIP1Q86YF9 867 aaKnown RBP23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 ERC1Q8IUD2 1116 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 DBNDD2Q9BQY9 259 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
SLC6A1-204ENST00000462473 CA12O43570 354 aa23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 HSPA8P11142 646 aaKnown RBP23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 IREB2P48200 963 aaKnown RBP23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 PRDM10Q9NQV6 1147 aa23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.21■■□□□ 1.31
SLC6A1-204ENST00000462473 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
SLC6A1-204ENST00000462473 MCAMP43121 646 aa23.2■■□□□ 1.3
SLC6A1-204ENST00000462473 FKBP1CQ5VVH2 108 aa23.2■■□□□ 1.3
SLC6A1-204ENST00000462473 PI16Q6UXB8 463 aa23.2■■□□□ 1.3
SLC6A1-204ENST00000462473 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
SLC6A1-204ENST00000462473 TEPSINQ96N21 525 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms