RNA–Protein interactions for RNA: ENST00000461703.6

TNFRSF25-209, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-209ENST00000461703 DZIP1LQ8IYY4 767 aaKnown RBP28.36■■■□□ 2.13
TNFRSF25-209ENST00000461703 LPIN2Q92539 896 aa28.36■■■□□ 2.13
TNFRSF25-209ENST00000461703 RASA3Q14644 834 aa28.35■■■□□ 2.13
TNFRSF25-209ENST00000461703 ARMC9Q7Z3E5 817 aa28.35■■■□□ 2.13
TNFRSF25-209ENST00000461703 ATP2B3Q16720 1220 aa28.34■■■□□ 2.13
TNFRSF25-209ENST00000461703 LDLRAD1Q5T700 205 aa28.34■■■□□ 2.13
TNFRSF25-209ENST00000461703 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.34■■■□□ 2.13
TNFRSF25-209ENST00000461703 PPP2R3BQ9Y5P8 575 aa28.34■■■□□ 2.13
TNFRSF25-209ENST00000461703 TBC1D22AQ8WUA7 517 aa28.33■■■□□ 2.13
TNFRSF25-209ENST00000461703 COPRSQ9NQ92 184 aa28.33■■■□□ 2.13
TNFRSF25-209ENST00000461703 SAGE1Q9NXZ1 904 aa28.33■■■□□ 2.13
TNFRSF25-209ENST00000461703 FBXO3Q9UK99 471 aa28.33■■■□□ 2.13
TNFRSF25-209ENST00000461703 IPO8O15397 1037 aaKnown RBP28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 GNAI3P08754 354 aa28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 ABHD8Q96I13 439 aa28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 CLMNQ96JQ2 1002 aa28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 CEP126Q9P2H0 1117 aa28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.32■■■□□ 2.12
TNFRSF25-209ENST00000461703 TCP10L2B9ZVM9 353 aa28.31■■■□□ 2.12
TNFRSF25-209ENST00000461703 ADORA1P30542 326 aa28.31■■■□□ 2.12
TNFRSF25-209ENST00000461703 IL15P40933 162 aaPredicted RBP28.31■■■□□ 2.12
TNFRSF25-209ENST00000461703 CACNB3P54284 484 aa28.31■■■□□ 2.12
TNFRSF25-209ENST00000461703 SRGAP3O43295 1099 aa28.3■■■□□ 2.12
TNFRSF25-209ENST00000461703 TMEM57Q8N5G2 664 aa28.3■■■□□ 2.12
TNFRSF25-209ENST00000461703 TEPSINQ96N21 525 aa28.3■■■□□ 2.12
TNFRSF25-209ENST00000461703 HDAC5Q9UQL6 1122 aa28.3■■■□□ 2.12
TNFRSF25-209ENST00000461703 PHKA1P46020 1223 aa28.29■■■□□ 2.12
TNFRSF25-209ENST00000461703 MTX1Q13505 466 aa28.29■■■□□ 2.12
TNFRSF25-209ENST00000461703 MAP3K11Q16584 847 aa28.29■■■□□ 2.12
TNFRSF25-209ENST00000461703 TEKT1Q969V4 418 aa28.28■■■□□ 2.12
TNFRSF25-209ENST00000461703 TMEM39BQ9GZU3 492 aa28.28■■■□□ 2.12
TNFRSF25-209ENST00000461703 USP2O75604 605 aaPredicted RBP28.27■■■□□ 2.12
TNFRSF25-209ENST00000461703 HDLBPQ00341 1268 aaKnown RBP28.27■■■□□ 2.12
TNFRSF25-209ENST00000461703 SPRYD7Q5W111 196 aa28.27■■■□□ 2.12
TNFRSF25-209ENST00000461703 ZKSCAN2Q63HK3 967 aa28.27■■■□□ 2.12
TNFRSF25-209ENST00000461703 MYH2Q9UKX2 1941 aa28.27■■■□□ 2.12
TNFRSF25-209ENST00000461703 PNMA6EA0A0J9YXQ4 647 aa28.26■■■□□ 2.11
TNFRSF25-209ENST00000461703 SUPT20HL1Q3ZLR7 823 aa28.26■■■□□ 2.11
TNFRSF25-209ENST00000461703 ZDHHC15Q96MV8 337 aa28.26■■■□□ 2.11
TNFRSF25-209ENST00000461703 MCOLN1Q9GZU1 580 aa28.26■■■□□ 2.11
TNFRSF25-209ENST00000461703 ZBED9Q6R2W3 1325 aa28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 PPP1R12BO60237 982 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 PRDX5P30044 214 aa28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 TIMM10P62072 90 aa28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 TFCP2Q12800 502 aa28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 TNFAIP1Q13829 316 aa28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 APOBEC3HQ6NTF7 200 aaKnown RBP28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 REM2Q8IYK8 340 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF25-209ENST00000461703 GNAI2P04899 355 aa28.24■■■□□ 2.11
TNFRSF25-209ENST00000461703 TM4SF4P48230 202 aa28.24■■■□□ 2.11
TNFRSF25-209ENST00000461703 WDR66Q8TBY9 1149 aa28.24■■■□□ 2.11
TNFRSF25-209ENST00000461703 TBC1D8O95759 1140 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 RLBP1P12271 317 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 GJA5P36382 358 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 DGKZQ13574 1117 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 DIXDC1Q155Q3 683 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 CCDC102BQ68D86 513 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 SLC10A4Q96EP9 437 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 WNK4Q96J92 1243 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 SUGT1Q9Y2Z0 365 aa28.23■■■□□ 2.11
TNFRSF25-209ENST00000461703 MAST3O60307 1309 aa28.22■■■□□ 2.11
TNFRSF25-209ENST00000461703 AK9Q5TCS8 1911 aa28.22■■■□□ 2.11
TNFRSF25-209ENST00000461703 A0A1B0GUL7 405 aa28.21■■■□□ 2.11
TNFRSF25-209ENST00000461703 MRIQ9BWK5 157 aa28.21■■■□□ 2.11
TNFRSF25-209ENST00000461703 C1orf115Q9H7X2 142 aa28.21■■■□□ 2.11
TNFRSF25-209ENST00000461703 IREB2P48200 963 aaKnown RBP28.2■■■□□ 2.1
TNFRSF25-209ENST00000461703 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.1
TNFRSF25-209ENST00000461703 R3HDMLQ9H3Y0 253 aa28.2■■■□□ 2.1
TNFRSF25-209ENST00000461703 DAGLAQ9Y4D2 1042 aa28.2■■■□□ 2.1
TNFRSF25-209ENST00000461703 TNNI2P48788 182 aa28.19■■■□□ 2.1
TNFRSF25-209ENST00000461703 RASGRF1Q13972 1273 aa28.19■■■□□ 2.1
TNFRSF25-209ENST00000461703 XAGE2Q96GT9 111 aa28.19■■■□□ 2.1
TNFRSF25-209ENST00000461703 GNL3LQ9NVN8 582 aaKnown RBP28.19■■■□□ 2.1
TNFRSF25-209ENST00000461703 SREBF2Q12772 1141 aa28.18■■■□□ 2.1
TNFRSF25-209ENST00000461703 ELP3Q9H9T3 547 aa28.18■■■□□ 2.1
TNFRSF25-209ENST00000461703 DENND2AQ9ULE3 1009 aa28.18■■■□□ 2.1
TNFRSF25-209ENST00000461703 SALL1Q9NSC2 1324 aa28.18■■■□□ 2.1
TNFRSF25-209ENST00000461703 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.17■■■□□ 2.1
TNFRSF25-209ENST00000461703 ANKRD13AQ8IZ07 590 aa28.17■■■□□ 2.1
TNFRSF25-209ENST00000461703 CNKSR2Q8WXI2 1034 aa28.17■■■□□ 2.1
TNFRSF25-209ENST00000461703 CCDC85CA6NKD9 419 aa28.16■■■□□ 2.1
TNFRSF25-209ENST00000461703 SEMA3EO15041 775 aa28.16■■■□□ 2.1
TNFRSF25-209ENST00000461703 LDHBP07195 334 aaKnown RBP28.16■■■□□ 2.1
TNFRSF25-209ENST00000461703 ZBTB48P10074 688 aaPredicted RBP28.16■■■□□ 2.1
TNFRSF25-209ENST00000461703 TMOD2Q9NZR1 351 aa28.16■■■□□ 2.1
TNFRSF25-209ENST00000461703 DOCK2Q92608 1830 aa28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 IGF2BP3O00425 579 aaKnown RBP eCLIP28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 CDC42EP5Q6NZY7 148 aa28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 FTSJ3Q8IY81 847 aaKnown RBP28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 ZNF296Q8WUU4 475 aaPredicted RBP28.15■■■□□ 2.1
TNFRSF25-209ENST00000461703 UNCXA6NJT0 531 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 VGLL4Q14135 290 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 FAM83AQ86UY5 434 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 ITPRIPQ8IWB1 547 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 NEUROD6Q96NK8 337 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 AKAP2Q9Y2D5 859 aa28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 MYO5AQ9Y4I1 1855 aaKnown RBP28.14■■■□□ 2.1
TNFRSF25-209ENST00000461703 MANSC4A6NHS7 340 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF25-209ENST00000461703 NFIAQ12857 509 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms