RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PIK3CDO00329 1044 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 EXOC5O00471 708 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 PROCP04070 461 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 HSPA1AP0DMV8 641 aaKnown RBP7.87□□□□□ -1.15
SPTA1-202ENST00000461624 HSPA1BP0DMV9 641 aaKnown RBP7.87□□□□□ -1.15
SPTA1-202ENST00000461624 EPXP11678 715 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 COL23A1Q86Y22 540 aaPredicted RBP7.87□□□□□ -1.15
SPTA1-202ENST00000461624 ALG2Q9H553 416 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 TFCP2L1Q9NZI6 479 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 IGSF1Q8N6C5 1336 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 HOXB4P17483 251 aaPredicted RBP7.86□□□□□ -1.15
SPTA1-202ENST00000461624 AMPD1P23109 780 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 KCNQ4P56696 695 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 GTF2IP78347 998 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 FSTL1Q12841 308 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 ARSJQ5FYB0 599 aaPredicted RBP7.86□□□□□ -1.15
SPTA1-202ENST00000461624 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 ARHGEF25Q86VW2 580 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 KIF13BQ9NQT8 1826 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 KIAA1210Q9ULL0 1709 aa7.86□□□□□ -1.15
SPTA1-202ENST00000461624 GNB5O14775 395 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 MAPTP10636 758 aaKnown RBP7.85□□□□□ -1.15
SPTA1-202ENST00000461624 SKIP12755 728 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 ADH6P28332 368 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 TNP2Q05952 138 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 MSL1Q68DK7 614 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 DOT1LQ8TEK3 1739 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 C5P01031 1676 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 BRCA1P38398 1863 aaKnown RBP7.85□□□□□ -1.15
SPTA1-202ENST00000461624 TAF1LQ8IZX4 1826 aa7.85□□□□□ -1.15
SPTA1-202ENST00000461624 DCDC2BA2VCK2 349 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 LINC00114Q6XXX2 140 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 BTBD6Q96KE9 485 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 ZIC5Q96T25 663 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 CDK19Q9BWU1 502 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 SCHIP1Q9P0W5 487 aaPredicted RBP7.84□□□□□ -1.15
SPTA1-202ENST00000461624 GJA3Q9Y6H8 435 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 USP3Q9Y6I4 520 aa7.84□□□□□ -1.15
SPTA1-202ENST00000461624 TNRC6CQ9HCJ0 1690 aaKnown RBP7.83□□□□□ -1.16
SPTA1-202ENST00000461624 PXDNLA1KZ92 1463 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 KRBA1A5PL33 1030 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 NEURL1BA8MQ27 555 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 COL8A1P27658 744 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 DGKGP49619 791 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 LAMC2Q13753 1193 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 NCOA4Q13772 614 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 ZNF358Q9NW07 568 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 NOP53Q9NZM5 478 aaKnown RBP7.83□□□□□ -1.16
SPTA1-202ENST00000461624 GPC6Q9Y625 555 aaPredicted RBP7.83□□□□□ -1.16
SPTA1-202ENST00000461624 UBR3Q6ZT12 1888 aa7.83□□□□□ -1.16
SPTA1-202ENST00000461624 ZBTB7CA1YPR0 619 aa7.82□□□□□ -1.16
SPTA1-202ENST00000461624 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
SPTA1-202ENST00000461624 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
SPTA1-202ENST00000461624 ADAM23O75077 832 aa7.82□□□□□ -1.16
SPTA1-202ENST00000461624 EFSO43281 561 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 CD33P20138 364 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 EPHA4P54764 986 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 GRIN2CQ14957 1233 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 TEAD4Q15561 434 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 ZNF468Q5VIY5 522 aaPredicted RBP7.81□□□□□ -1.16
SPTA1-202ENST00000461624 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 HCN2Q9UL51 889 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 KCPQ6ZWJ8 1503 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 ANKRD36BQ8N2N9 1353 aa7.81□□□□□ -1.16
SPTA1-202ENST00000461624 ARFGEF1Q9Y6D6 1849 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 N4BP2Q86UW6 1770 aaPredicted RBP7.8□□□□□ -1.16
SPTA1-202ENST00000461624 POM121CA8CG34 1229 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 HDGFL1Q5TGJ6 251 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 CHSY3Q70JA7 882 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 FCHSD1Q86WN1 690 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 PLEKHM2Q8IWE5 1019 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPTA1-202ENST00000461624 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 GLMNQ92990 594 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 CALR3Q96L12 384 aaKnown RBP7.8□□□□□ -1.16
SPTA1-202ENST00000461624 A0A0C4DFX4 3053 aa7.8□□□□□ -1.16
SPTA1-202ENST00000461624 SBF1O95248 1867 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 C4BP0C0L5 1744 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 IL2RBP14784 551 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 L3MBTL2Q969R5 705 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 MPHOSPH9Q99550 1183 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 KLF15Q9UIH9 416 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-202ENST00000461624 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 PLEKHG2Q9H7P9 1386 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 LTN1O94822 1766 aa7.79□□□□□ -1.16
SPTA1-202ENST00000461624 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 EML1O00423 815 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 NOS2P35228 1153 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 TXLNAP40222 546 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 RGS19P49795 217 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms