RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DLK2Q6UY11 383 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 RHPN1Q8TCX5 695 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 KLRG1Q96E93 195 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 CDCA5Q96FF9 252 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 PRMT6Q96LA8 375 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 VEZTQ9HBM0 779 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 PDS5AQ29RF7 1337 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 SPTY2D1Q68D10 685 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 AACSQ86V21 672 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 EAF2Q96CJ1 260 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 ABCF2Q9UG63 623 aa12.99□□□□□ -0.33
TRAPPC12-213ENST00000461577 PRDX5P30044 214 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 NF2P35240 595 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 DBNLQ9UJU6 430 aaKnown RBP12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
TRAPPC12-213ENST00000461577 CNTNAP1P78357 1384 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 MCAMP43121 646 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 HHIPL2Q6UWX4 724 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 MYH2Q9UKX2 1941 aa12.97□□□□□ -0.33
TRAPPC12-213ENST00000461577 AOX1Q06278 1338 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 RASSF10A6NK89 507 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 TNNI2P48788 182 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 PI16Q6UXB8 463 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 DEFB129Q9H1M3 183 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
TRAPPC12-213ENST00000461577 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 ECE1P42892 770 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 HUNKP57058 714 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 AAMPQ13685 434 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 DIXDC1Q155Q3 683 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 LRP2BPQ9P2M1 347 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 AKAP11Q9UKA4 1901 aa12.95□□□□□ -0.34
TRAPPC12-213ENST00000461577 VEGFBP49765 207 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 GSTO1P78417 241 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 GRM1Q13255 1194 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 RASA3Q14644 834 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
TRAPPC12-213ENST00000461577 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 SMARCA5O60264 1052 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 LDHCP07864 332 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 ZAP70P43403 619 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 FKBP1BP68106 108 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 MECOMQ03112 1051 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 PRKG1Q13976 671 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 SUPT20HL1Q3ZLR7 823 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 HHIPL1Q96JK4 782 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
TRAPPC12-213ENST00000461577 MROH7-TTC4A0A0A0MT08 1334 aa12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 CACNB3P54284 484 aa12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 RGMBQ6NW40 437 aa12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
TRAPPC12-213ENST00000461577 GAKO14976 1311 aa12.91□□□□□ -0.34
TRAPPC12-213ENST00000461577 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms