RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ARXQ96QS3 562 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 POLMQ9NP87 494 aaPredicted RBP9.14□□□□□ -0.95
NUP50-212ENST00000461194 CEMIPQ8WUJ3 1361 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 SPINT1O43278 529 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
NUP50-212ENST00000461194 DKK1O94907 266 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 NEFMP07197 916 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 CTSOP43234 321 aaPredicted RBP9.13□□□□□ -0.95
NUP50-212ENST00000461194 SEC13P55735 322 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 TEFQ10587 303 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 SIX5Q8N196 739 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 PLEKHF1Q96S99 279 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 ESYT1Q9BSJ8 1104 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 PNNQ9H307 717 aaKnown RBP9.13□□□□□ -0.95
NUP50-212ENST00000461194 PRKRIP1Q9H875 184 aaPredicted RBP9.13□□□□□ -0.95
NUP50-212ENST00000461194 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 C4BP0C0L5 1744 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 C5P01031 1676 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 ADAMTS7Q9UKP4 1686 aa9.13□□□□□ -0.95
NUP50-212ENST00000461194 QSER1Q2KHR3 1735 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 BACH1O14867 736 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 RPS6KA4O75676 772 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 CENPCQ03188 943 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 SMIM5Q71RC9 77 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
NUP50-212ENST00000461194 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
NUP50-212ENST00000461194 RTCBQ9Y3I0 505 aaKnown RBP9.12□□□□□ -0.95
NUP50-212ENST00000461194 SCN11AQ9UI33 1791 aa9.12□□□□□ -0.95
NUP50-212ENST00000461194 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 FIGNL2A6NMB9 653 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 LCE2BO14633 110 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 LGR5O75473 907 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
NUP50-212ENST00000461194 ELOAQ14241 798 aaKnown RBP9.11□□□□□ -0.95
NUP50-212ENST00000461194 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 ZNF790Q6PG37 636 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 DNAJC10Q8IXB1 793 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 TTC5Q8N0Z6 440 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 SYT17Q9BSW7 474 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 ZMIZ1Q9ULJ6 1067 aa9.11□□□□□ -0.95
NUP50-212ENST00000461194 TAF1LQ8IZX4 1826 aa9.1□□□□□ -0.95
NUP50-212ENST00000461194 BTBD11A6QL63 1104 aa9.1□□□□□ -0.95
NUP50-212ENST00000461194 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
NUP50-212ENST00000461194 MCM10Q7L590 875 aa9.1□□□□□ -0.95
NUP50-212ENST00000461194 TNS4Q8IZW8 715 aa9.1□□□□□ -0.95
NUP50-212ENST00000461194 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
NUP50-212ENST00000461194 KCPQ6ZWJ8 1503 aa9.1□□□□□ -0.95
NUP50-212ENST00000461194 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
NUP50-212ENST00000461194 SMTNP53814 917 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 TLR1Q15399 786 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 TMEM164Q5U3C3 297 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 ZNF496Q96IT1 587 aaPredicted RBP9.09□□□□□ -0.95
NUP50-212ENST00000461194 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 TUBGCP6Q96RT7 1819 aa9.09□□□□□ -0.95
NUP50-212ENST00000461194 KCNQ3O43525 872 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 STARD3NLO95772 234 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 RFC4P35249 363 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
NUP50-212ENST00000461194 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUP50-212ENST00000461194 NLGN1Q8N2Q7 840 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 RETREG2Q8NC44 543 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 TEX13AQ9BXU3 409 aaPredicted RBP9.08□□□□□ -0.96
NUP50-212ENST00000461194 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 GMPR2Q9P2T1 348 aaKnown RBP9.08□□□□□ -0.96
NUP50-212ENST00000461194 HEG1Q9ULI3 1381 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 COL24A1Q17RW2 1714 aa9.08□□□□□ -0.96
NUP50-212ENST00000461194 SOS1Q07889 1333 aaPredicted RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 UBR3Q6ZT12 1888 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 CICQ96RK0 1608 aaPredicted RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 A6NJY4 79 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 GYS1P13807 737 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 TAF7Q15545 349 aaPredicted RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 PRICKLE2Q7Z3G6 844 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 PNISRQ8TF01 805 aaKnown RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
NUP50-212ENST00000461194 GRIP2Q9C0E4 1043 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
NUP50-212ENST00000461194 COL5A3P25940 1745 aaPredicted RBP9.06□□□□□ -0.96
NUP50-212ENST00000461194 M0R2N6 131 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 MAN1A2O60476 641 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 MMP10P09238 476 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
NUP50-212ENST00000461194 TMPOP42166 694 aaKnown RBP9.06□□□□□ -0.96
NUP50-212ENST00000461194 RIPK4P57078 832 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 TBCELQ5QJ74 424 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 FOXD4L5Q5VV16 416 aaPredicted RBP9.06□□□□□ -0.96
NUP50-212ENST00000461194 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
NUP50-212ENST00000461194 CD2APQ9Y5K6 639 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms