RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 PRMT6Q96LA8 375 aaPredicted RBP24.63■■□□□ 1.53
SNAPC3-204ENST00000461041 HMG20BQ9P0W2 317 aa24.63■■□□□ 1.53
SNAPC3-204ENST00000461041 MAST3O60307 1309 aa24.62■■□□□ 1.53
SNAPC3-204ENST00000461041 TRPM7Q96QT4 1865 aa24.62■■□□□ 1.53
SNAPC3-204ENST00000461041 PRDX5P30044 214 aa24.62■■□□□ 1.53
SNAPC3-204ENST00000461041 TTC39AQ5SRH9 613 aa24.62■■□□□ 1.53
SNAPC3-204ENST00000461041 AACSQ86V21 672 aa24.62■■□□□ 1.53
SNAPC3-204ENST00000461041 LDHBP07195 334 aaKnown RBP24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 MCAMP43121 646 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 CST9Q5W186 159 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 PI16Q6UXB8 463 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 ZGPATQ8N5A5 531 aaKnown RBP24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 SPATA5Q8NB90 893 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 TEKT1Q969V4 418 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 SCAF8Q9UPN6 1271 aaKnown RBP24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 ECM29Q5VYK3 1845 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 AOX1Q06278 1338 aa24.61■■□□□ 1.53
SNAPC3-204ENST00000461041 MYO1BO43795 1136 aa24.6■■□□□ 1.53
SNAPC3-204ENST00000461041 CELF2O95319 508 aaKnown RBP24.6■■□□□ 1.53
SNAPC3-204ENST00000461041 CLASRPQ8N2M8 674 aaKnown RBP24.6■■□□□ 1.53
SNAPC3-204ENST00000461041 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
SNAPC3-204ENST00000461041 ZNF408Q9H9D4 720 aa24.6■■□□□ 1.53
SNAPC3-204ENST00000461041 CLRN2A0PK11 232 aa24.59■■□□□ 1.53
SNAPC3-204ENST00000461041 APOBEC3FQ8IUX4 373 aaKnown RBP24.59■■□□□ 1.53
SNAPC3-204ENST00000461041 ZNF512BQ96KM6 892 aaPredicted RBP24.59■■□□□ 1.53
SNAPC3-204ENST00000461041 DCTPP1Q9H773 170 aa24.59■■□□□ 1.53
SNAPC3-204ENST00000461041 ABCF2Q9UG63 623 aa24.59■■□□□ 1.53
SNAPC3-204ENST00000461041 HHIPL2Q6UWX4 724 aa24.58■■□□□ 1.53
SNAPC3-204ENST00000461041 DNAJC5GQ8N7S2 189 aa24.58■■□□□ 1.53
SNAPC3-204ENST00000461041 AAMPQ13685 434 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 SPTY2D1Q68D10 685 aaPredicted RBP24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 EXOC6Q8TAG9 804 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 CDCA5Q96FF9 252 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 ZDHHC15Q96MV8 337 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 LRRCC1Q9C099 1032 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 TDRD3Q9H7E2 651 aaKnown RBP24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 SNRKQ9NRH2 765 aa24.57■■□□□ 1.52
SNAPC3-204ENST00000461041 DIXDC1Q155Q3 683 aa24.56■■□□□ 1.52
SNAPC3-204ENST00000461041 SPDYE2Q495Y8 402 aa24.56■■□□□ 1.52
SNAPC3-204ENST00000461041 VEZTQ9HBM0 779 aa24.56■■□□□ 1.52
SNAPC3-204ENST00000461041 ZNF70Q9UC06 446 aaPredicted RBP24.56■■□□□ 1.52
SNAPC3-204ENST00000461041 AKAP11Q9UKA4 1901 aa24.55■■□□□ 1.52
SNAPC3-204ENST00000461041 IFIT2P09913 472 aaKnown RBP24.55■■□□□ 1.52
SNAPC3-204ENST00000461041 TBC1D9Q6ZT07 1266 aa24.55■■□□□ 1.52
SNAPC3-204ENST00000461041 ABT1Q9ULW3 272 aaKnown RBP24.55■■□□□ 1.52
SNAPC3-204ENST00000461041 PRAMEF18Q5VWM3 479 aa24.54■■□□□ 1.52
SNAPC3-204ENST00000461041 APOBEC3HQ6NTF7 200 aaKnown RBP24.54■■□□□ 1.52
SNAPC3-204ENST00000461041 ERICH6Q7L0X2 663 aa24.54■■□□□ 1.52
SNAPC3-204ENST00000461041 DZIP1Q86YF9 867 aaKnown RBP24.54■■□□□ 1.52
SNAPC3-204ENST00000461041 DAGLAQ9Y4D2 1042 aa24.54■■□□□ 1.52
SNAPC3-204ENST00000461041 SMARCA5O60264 1052 aaPredicted RBP24.53■■□□□ 1.52
SNAPC3-204ENST00000461041 ZAP70P43403 619 aa24.53■■□□□ 1.52
SNAPC3-204ENST00000461041 KLRG1Q96E93 195 aa24.53■■□□□ 1.52
SNAPC3-204ENST00000461041 DEFB129Q9H1M3 183 aa24.53■■□□□ 1.52
SNAPC3-204ENST00000461041 TLL2Q9Y6L7 1015 aa24.53■■□□□ 1.52
SNAPC3-204ENST00000461041 CYP2E1P05181 493 aaPredicted RBP24.52■■□□□ 1.52
SNAPC3-204ENST00000461041 GBA2Q9HCG7 927 aaPredicted RBP24.52■■□□□ 1.52
SNAPC3-204ENST00000461041 MKRN1Q9UHC7 482 aaKnown RBP24.52■■□□□ 1.52
SNAPC3-204ENST00000461041 CNTNAP1P78357 1384 aa24.52■■□□□ 1.52
SNAPC3-204ENST00000461041 RASSF10A6NK89 507 aa24.51■■□□□ 1.51
SNAPC3-204ENST00000461041 MECOMQ03112 1051 aa24.51■■□□□ 1.51
SNAPC3-204ENST00000461041 LRP2BPQ9P2M1 347 aa24.51■■□□□ 1.51
SNAPC3-204ENST00000461041 PPP2R3BQ9Y5P8 575 aa24.51■■□□□ 1.51
SNAPC3-204ENST00000461041 IRX6P78412 446 aaPredicted RBP24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 HDAC1Q13547 482 aaPredicted RBP24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 TNFAIP1Q13829 316 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 SAPCD2Q86UD0 394 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 SLF2Q8IX21 1173 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 C2orf69Q8N8R5 385 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 RAI14Q9P0K7 980 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 MYH2Q9UKX2 1941 aa24.5■■□□□ 1.51
SNAPC3-204ENST00000461041 TCP10L2B9ZVM9 353 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 RASA3Q14644 834 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 DEFB115Q30KQ5 88 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 ZNF384Q8TF68 577 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 NSUN4Q96CB9 384 aaKnown RBP24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 TMOD2Q9NZR1 351 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 GAKO14976 1311 aa24.49■■□□□ 1.51
SNAPC3-204ENST00000461041 CACNB3P54284 484 aa24.48■■□□□ 1.51
SNAPC3-204ENST00000461041 FAM163AQ96GL9 167 aaPredicted RBP24.48■■□□□ 1.51
SNAPC3-204ENST00000461041 PIH1D3Q9NQM4 214 aaKnown RBP24.48■■□□□ 1.51
SNAPC3-204ENST00000461041 NDUFB9Q9Y6M9 179 aa24.48■■□□□ 1.51
SNAPC3-204ENST00000461041 MROH7-TTC4A0A0A0MT08 1334 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 NF2P35240 595 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 TNNI2P48788 182 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 GSTO1P78417 241 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 CDC42EP5Q6NZY7 148 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 PAPPA2Q9BXP8 1791 aa24.47■■□□□ 1.51
SNAPC3-204ENST00000461041 HUNKP57058 714 aa24.46■■□□□ 1.51
SNAPC3-204ENST00000461041 MAST2Q6P0Q8 1798 aa24.46■■□□□ 1.51
SNAPC3-204ENST00000461041 LDHCP07864 332 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 FKBP1BP68106 108 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 FKBP1CQ5VVH2 108 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 HHIPL1Q96JK4 782 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 ANTXR1Q9H6X2 564 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 USP40Q9NVE5 1235 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 CEP350Q5VT06 3117 aa24.45■■□□□ 1.5
SNAPC3-204ENST00000461041 MYO5AQ9Y4I1 1855 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms