RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 MTRQ99707 1265 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 PLA2G12BQ9BX93 195 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 GREM2Q9H772 168 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 CACNA1SQ13698 1873 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 PPEF1O14829 653 aaPredicted RBP9.2□□□□□ -0.94
RTN4-212ENST00000461004 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
RTN4-212ENST00000461004 CSF1RP07333 972 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 GRAPQ13588 217 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 LMBR1LQ6UX01 489 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 GRAPLQ8TC17 118 aaPredicted RBP9.2□□□□□ -0.94
RTN4-212ENST00000461004 PANK1Q8TE04 598 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 MEIS3Q99687 375 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 UTYO14607 1347 aa9.2□□□□□ -0.94
RTN4-212ENST00000461004 WTIPA6NIX2 430 aaPredicted RBP9.19□□□□□ -0.94
RTN4-212ENST00000461004 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
RTN4-212ENST00000461004 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
RTN4-212ENST00000461004 MTMR2Q13614 643 aa9.19□□□□□ -0.94
RTN4-212ENST00000461004 CCDC152Q4G0S7 254 aa9.19□□□□□ -0.94
RTN4-212ENST00000461004 C20orf194Q5TEA3 1177 aa9.19□□□□□ -0.94
RTN4-212ENST00000461004 INTS3Q68E01 1043 aaKnown RBP9.19□□□□□ -0.94
RTN4-212ENST00000461004 ANKRD44Q8N8A2 993 aa9.19□□□□□ -0.94
RTN4-212ENST00000461004 BICC1Q9H694 974 aaKnown RBP9.19□□□□□ -0.94
RTN4-212ENST00000461004 TLL1O43897 1013 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 NR1I2O75469 434 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 BBOX1O75936 387 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 ITGA6P23229 1130 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 RPS8P62241 208 aaKnown RBP9.18□□□□□ -0.94
RTN4-212ENST00000461004 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 SP8Q8IXZ3 490 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
RTN4-212ENST00000461004 SNED1Q8TER0 1413 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
RTN4-212ENST00000461004 GPR101Q96P66 508 aaPredicted RBP9.18□□□□□ -0.94
RTN4-212ENST00000461004 ZNF277Q9NRM2 450 aaPredicted RBP9.18□□□□□ -0.94
RTN4-212ENST00000461004 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 CHMP3Q9Y3E7 222 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 ATP6V0A2Q9Y487 856 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
RTN4-212ENST00000461004 GPSM2P81274 684 aa9.17□□□□□ -0.94
RTN4-212ENST00000461004 CCDC93Q567U6 631 aa9.17□□□□□ -0.94
RTN4-212ENST00000461004 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
RTN4-212ENST00000461004 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
RTN4-212ENST00000461004 SNAP23O00161 211 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 UBTFL1P0CB47 393 aaPredicted RBP9.16□□□□□ -0.94
RTN4-212ENST00000461004 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
RTN4-212ENST00000461004 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
RTN4-212ENST00000461004 Q3C1V9 767 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
RTN4-212ENST00000461004 ANKRD18AQ8IVF6 992 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
RTN4-212ENST00000461004 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
RTN4-212ENST00000461004 TAOK3Q9H2K8 898 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 RNF181Q9P0P0 153 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
RTN4-212ENST00000461004 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 RTL9Q8NET4 1388 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 ANKRD18BA2A2Z9 1011 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 YY1P25490 414 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 RFX5P48382 616 aaPredicted RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 RETREG3Q86VR2 466 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 RTKN2Q8IZC4 609 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 MPNDQ8N594 471 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 HELBQ8NG08 1087 aaPredicted RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 NKX2-3Q8TAU0 364 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 SNRKQ9NRH2 765 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 POLLQ9UGP5 575 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 MINPP1Q9UNW1 487 aa9.15□□□□□ -0.94
RTN4-212ENST00000461004 NSFL1CQ9UNZ2 370 aaKnown RBP9.15□□□□□ -0.94
RTN4-212ENST00000461004 COL4A5P29400 1685 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 MYH3P11055 1940 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 LMNB1P20700 586 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 CCDC57Q2TAC2 916 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 LRRC24Q50LG9 513 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 SOGA3Q5TF21 947 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 DPP8Q6V1X1 898 aaPredicted RBP9.14□□□□□ -0.95
RTN4-212ENST00000461004 CDC5LQ99459 802 aaKnown RBP9.14□□□□□ -0.95
RTN4-212ENST00000461004 USB1Q9BQ65 265 aaKnown RBP9.14□□□□□ -0.95
RTN4-212ENST00000461004 BSDC1Q9NW68 430 aaPredicted RBP9.14□□□□□ -0.95
RTN4-212ENST00000461004 SBF1O95248 1867 aa9.14□□□□□ -0.95
RTN4-212ENST00000461004 LTBP3Q9NS15 1303 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 TAF5LO75529 589 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 AP1G2O75843 785 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
RTN4-212ENST00000461004 IGHMBP2P38935 993 aaKnown RBP9.13□□□□□ -0.95
RTN4-212ENST00000461004 IARSP41252 1262 aaKnown RBP9.13□□□□□ -0.95
RTN4-212ENST00000461004 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 AOC3Q16853 763 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 TBC1D16Q8TBP0 767 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms