RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
APTX-209ENST00000460940 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
APTX-209ENST00000460940 IGSF3O75054 1194 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 EGFRP00533 1210 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 MCAMP43121 646 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
APTX-209ENST00000460940 ZBED3Q96IU2 234 aaPredicted RBP13.53□□□□□ -0.24
APTX-209ENST00000460940 MRIQ9BWK5 157 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
APTX-209ENST00000460940 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.53□□□□□ -0.24
APTX-209ENST00000460940 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
APTX-209ENST00000460940 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
APTX-209ENST00000460940 SCARF1Q14162 830 aa13.52□□□□□ -0.25
APTX-209ENST00000460940 CFAP100Q494V2 611 aa13.52□□□□□ -0.25
APTX-209ENST00000460940 TEKT1Q969V4 418 aa13.52□□□□□ -0.25
APTX-209ENST00000460940 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 WNT10BO00744 389 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 GRIK5Q16478 980 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 MAP1SQ66K74 1059 aaPredicted RBP13.51□□□□□ -0.25
APTX-209ENST00000460940 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 CNTROBQ8N137 903 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 DCPSQ96C86 337 aaKnown RBP13.51□□□□□ -0.25
APTX-209ENST00000460940 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 GGA3Q9NZ52 723 aa13.51□□□□□ -0.25
APTX-209ENST00000460940 MYO1BO43795 1136 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
APTX-209ENST00000460940 PRDX5P30044 214 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 CRKP46108 304 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 HHIPL2Q6UWX4 724 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 ABCF2Q9UG63 623 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
APTX-209ENST00000460940 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
APTX-209ENST00000460940 APOBEC3FQ8IUX4 373 aaKnown RBP13.5□□□□□ -0.25
APTX-209ENST00000460940 ZDHHC15Q96MV8 337 aa13.5□□□□□ -0.25
APTX-209ENST00000460940 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.5□□□□□ -0.25
APTX-209ENST00000460940 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
APTX-209ENST00000460940 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
APTX-209ENST00000460940 ATP5JP18859 108 aa13.49□□□□□ -0.25
APTX-209ENST00000460940 ANGEL2Q5VTE6 544 aaKnown RBP13.49□□□□□ -0.25
APTX-209ENST00000460940 SULF1Q8IWU6 871 aa13.49□□□□□ -0.25
APTX-209ENST00000460940 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
APTX-209ENST00000460940 MAST2Q6P0Q8 1798 aa13.49□□□□□ -0.25
APTX-209ENST00000460940 ZAP70P43403 619 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 GSTO1P78417 241 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
APTX-209ENST00000460940 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 GAKO14976 1311 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
APTX-209ENST00000460940 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 IGHDP01880 384 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
APTX-209ENST00000460940 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
APTX-209ENST00000460940 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 LRP2BPQ9P2M1 347 aa13.48□□□□□ -0.25
APTX-209ENST00000460940 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 HSPA6P17066 643 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 DIXDC1Q155Q3 683 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
APTX-209ENST00000460940 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
APTX-209ENST00000460940 GLIS2Q9BZE0 524 aaPredicted RBP13.47□□□□□ -0.25
APTX-209ENST00000460940 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 DAGLAQ9Y4D2 1042 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 MROH7-TTC4A0A0A0MT08 1334 aa13.47□□□□□ -0.25
APTX-209ENST00000460940 MECOMQ03112 1051 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 TNFAIP1Q13829 316 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
APTX-209ENST00000460940 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.25
APTX-209ENST00000460940 HAUS7Q99871 368 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
APTX-209ENST00000460940 ERC2O15083 957 aa13.46□□□□□ -0.26
APTX-209ENST00000460940 LDHCP07864 332 aa13.46□□□□□ -0.26
APTX-209ENST00000460940 APLP1P51693 650 aa13.46□□□□□ -0.26
APTX-209ENST00000460940 USP48Q86UV5 1035 aa13.46□□□□□ -0.26
APTX-209ENST00000460940 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.26
APTX-209ENST00000460940 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.26
APTX-209ENST00000460940 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.26
APTX-209ENST00000460940 ZNF70Q9UC06 446 aaPredicted RBP13.46□□□□□ -0.26
APTX-209ENST00000460940 ADM5C9JUS6 153 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 MX1P20591 662 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 NUCB1Q02818 461 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 FKBP1CQ5VVH2 108 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
APTX-209ENST00000460940 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
APTX-209ENST00000460940 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
APTX-209ENST00000460940 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
APTX-209ENST00000460940 TRAF5O00463 557 aa13.44□□□□□ -0.26
APTX-209ENST00000460940 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms