RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
CSDC2-202ENST00000460790 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 SUGT1Q9Y2Z0 365 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 PSME4Q14997 1843 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 MAST3O60307 1309 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 NFKBIEO00221 500 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 CYP7A1P22680 504 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
CSDC2-202ENST00000460790 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
CSDC2-202ENST00000460790 GRIK5Q16478 980 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
CSDC2-202ENST00000460790 CCDC129Q6ZRS4 1044 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
CSDC2-202ENST00000460790 ZNF646O15015 1829 aaPredicted RBP13.09□□□□□ -0.31
CSDC2-202ENST00000460790 USP17L3A6NCW0 530 aa13.08□□□□□ -0.32
CSDC2-202ENST00000460790 USP17L4A6NCW7 530 aa13.08□□□□□ -0.32
CSDC2-202ENST00000460790 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
CSDC2-202ENST00000460790 USP17L1Q7RTZ2 530 aa13.08□□□□□ -0.32
CSDC2-202ENST00000460790 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 GPAA1O43292 621 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 LDHCP07864 332 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
CSDC2-202ENST00000460790 HSPA4P34932 840 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 GSTO1P78417 241 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 ADGRA1Q86SQ6 560 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 DZIP1Q86YF9 867 aaKnown RBP13.07□□□□□ -0.32
CSDC2-202ENST00000460790 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
CSDC2-202ENST00000460790 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
CSDC2-202ENST00000460790 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 ZNRF3Q9ULT6 936 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 SBF1O95248 1867 aa13.07□□□□□ -0.32
CSDC2-202ENST00000460790 COL4A5P29400 1685 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
CSDC2-202ENST00000460790 MCCP23508 829 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
CSDC2-202ENST00000460790 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
CSDC2-202ENST00000460790 MBD4O95243 580 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 VIL1P09327 827 aaKnown RBP13.05□□□□□ -0.32
CSDC2-202ENST00000460790 GNAT2P19087 354 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 PPP4CP60510 307 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 KCNB2Q92953 911 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 KIF2CQ99661 725 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
CSDC2-202ENST00000460790 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 MRIQ9BWK5 157 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 ARMT1Q9H993 441 aa13.05□□□□□ -0.32
CSDC2-202ENST00000460790 RBM8AQ9Y5S9 174 aaKnown RBP13.05□□□□□ -0.32
CSDC2-202ENST00000460790 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
CSDC2-202ENST00000460790 FOXP2O15409 715 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 PRELPP51888 382 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 ANAPC15P60006 121 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 RASSF7Q02833 373 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 ALX1Q15699 326 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 ARHGAP27Q6ZUM4 889 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
CSDC2-202ENST00000460790 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
CSDC2-202ENST00000460790 RPAP1Q9BWH6 1393 aaPredicted RBP13.04□□□□□ -0.32
CSDC2-202ENST00000460790 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 PSMD14O00487 310 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 RAD17O75943 681 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 FGAP02671 866 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 DYNLL1P63167 89 aaKnown RBP13.03□□□□□ -0.32
CSDC2-202ENST00000460790 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
CSDC2-202ENST00000460790 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSDC2-202ENST00000460790 CTNNA3Q9UI47 895 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 GAKO14976 1311 aa13.03□□□□□ -0.32
CSDC2-202ENST00000460790 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.32
CSDC2-202ENST00000460790 GSG1L2A8MUP6 293 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
CSDC2-202ENST00000460790 SLC27A2O14975 620 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 PRKAB2O43741 272 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 BAG3O95817 575 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSDC2-202ENST00000460790 CXCL9Q07325 125 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 RSBN1LQ6PCB5 846 aaPredicted RBP13.02□□□□□ -0.33
CSDC2-202ENST00000460790 HHIPL2Q6UWX4 724 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 IFNL3Q8IZI9 196 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms