RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
CPNE6-202ENST00000460657 TDRD7Q8NHU6 1098 aaKnown RBP13.81□□□□□ -0.2
CPNE6-202ENST00000460657 CTAGE1Q96RT6 745 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 TECPR2O15040 1411 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 NLRP12P59046 1061 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 PDE4BQ07343 736 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 SYT10Q6XYQ8 523 aa13.81□□□□□ -0.2
CPNE6-202ENST00000460657 CCDC12Q8WUD4 166 aaPredicted RBP13.81□□□□□ -0.2
CPNE6-202ENST00000460657 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 JAKMIP3Q5VZ66 844 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 IQCEQ6IPM2 695 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 IQSEC3Q9UPP2 1182 aaPredicted RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 ERO1AQ96HE7 468 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 N4BP3O15049 544 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 PDIA3P30101 505 aaKnown RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 RILPL1Q5EBL4 403 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 MRFAP1L1Q96HT8 127 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 RTL9Q8NET4 1388 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 KRT18P05783 430 aaKnown RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 LRMPQ12912 555 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
CPNE6-202ENST00000460657 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
CPNE6-202ENST00000460657 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 FANCCQ00597 558 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 KRT40Q6A162 431 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 DHX58Q96C10 678 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 BCL2L12Q9HB09 334 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 CUTAO60888 179 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 IGKV5-2P06315 115 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 SPAG1Q07617 926 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
CPNE6-202ENST00000460657 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
CPNE6-202ENST00000460657 SH3TC1Q8TE82 1336 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 MAGEB6P1A0A0J9YX57 407 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 PDE8AO60658 829 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 UBA7P41226 1012 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 KIAA1524Q8TCG1 905 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 TSC1Q92574 1164 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
CPNE6-202ENST00000460657 CALM1P0DP23 149 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 CALM2P0DP24 149 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 CALM3P0DP25 149 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
CPNE6-202ENST00000460657 FKBP15Q5T1M5 1219 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
CPNE6-202ENST00000460657 ADAMTS13Q76LX8 1427 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 ZPR1O75312 459 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 CIAO1O76071 339 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 ATP2B2Q01814 1243 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 AXDND1Q5T1B0 1012 aaPredicted RBP13.78□□□□□ -0.2
CPNE6-202ENST00000460657 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
CPNE6-202ENST00000460657 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
CPNE6-202ENST00000460657 POLR3GO15318 223 aaPredicted RBP13.77□□□□□ -0.2
CPNE6-202ENST00000460657 DEXIO95424 95 aa13.77□□□□□ -0.2
CPNE6-202ENST00000460657 FGAP02671 866 aa13.77□□□□□ -0.2
CPNE6-202ENST00000460657 RESTQ13127 1097 aa13.77□□□□□ -0.2
CPNE6-202ENST00000460657 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.2
CPNE6-202ENST00000460657 CCDC175P0C221 793 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 KRT2P35908 639 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
CPNE6-202ENST00000460657 LPIN2Q92539 896 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 PHKBQ93100 1093 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 ZNF532Q9HCE3 1301 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 SPA17Q15506 151 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
CPNE6-202ENST00000460657 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 TCP11L1Q9NUJ3 509 aa13.77□□□□□ -0.21
CPNE6-202ENST00000460657 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
CPNE6-202ENST00000460657 EPHA10Q5JZY3 1008 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 MAST3O60307 1309 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 A0A1W2PQ27 194 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms