RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 HMG20BQ9P0W2 317 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 ARFGEF1Q9Y6D6 1849 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 H7C1D1 291 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 RAD17O75943 681 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 HDLBPQ00341 1268 aaKnown RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 CXCL9Q07325 125 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 DZIP1Q86YF9 867 aaKnown RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 PLEKHM2Q8IWE5 1019 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 BRCA1P38398 1863 aaKnown RBP13.35□□□□□ -0.27
SMNDC1-203ENST00000460483 DUOX1Q9NRD9 1551 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 USP17L8P0C7I0 530 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 MCAMP43121 646 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
SMNDC1-203ENST00000460483 GOLIM4O00461 696 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 PSMD14O00487 310 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 MYO1BO43795 1136 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 BAG3O95817 575 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 ZAP70P43403 619 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 COL4A1P02462 1669 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.28
SMNDC1-203ENST00000460483 YDJCA8MPS7 323 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 RGS3P49796 1198 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 TTC22Q5TAA0 569 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 SLC51AQ86UW1 340 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 SERPINA10Q9UK55 444 aa13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 TTF2Q9UNY4 1162 aaKnown RBP13.32□□□□□ -0.28
SMNDC1-203ENST00000460483 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 PLCG2P16885 1265 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 MFAP1P55081 439 aaKnown RBP13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 NAA16Q6N069 864 aaPredicted RBP13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
SMNDC1-203ENST00000460483 RBM5P52756 815 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 HHIPL2Q6UWX4 724 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 OTUD7AQ8TE49 926 aaPredicted RBP13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 TMOD2Q9NZR1 351 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 HACL1Q9UJ83 578 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
SMNDC1-203ENST00000460483 TAF1P21675 1872 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 PDE4AP27815 886 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 TIE1P35590 1138 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 GMPSP49915 693 aaPredicted RBP13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 PRELPP51888 382 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 SCARF1Q14162 830 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 DIAPH3Q9NSV4 1193 aa13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
SMNDC1-203ENST00000460483 SPEF2Q9C093 1822 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 TSHZ3Q63HK5 1081 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 USP50Q70EL3 339 aaPredicted RBP13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 KCNQ5Q9NR82 932 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 ZNF541Q9H0D2 1346 aa13.28□□□□□ -0.28
SMNDC1-203ENST00000460483 CACNA1SQ13698 1873 aa13.27□□□□□ -0.28
SMNDC1-203ENST00000460483 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 CYP7A1P22680 504 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 PRDX5P30044 214 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 MECOMQ03112 1051 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 TNFAIP1Q13829 316 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms