RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 DICER1Q9UPY3 1922 aaKnown RBP14.88□□□□□ -0.03
HDAC4-206ENST00000460235 GLTPD2A6NH11 291 aa14.88□□□□□ -0.03
HDAC4-206ENST00000460235 MYO1BO43795 1136 aa14.88□□□□□ -0.03
HDAC4-206ENST00000460235 HHIPL2Q6UWX4 724 aa14.88□□□□□ -0.03
HDAC4-206ENST00000460235 PI16Q6UXB8 463 aa14.88□□□□□ -0.03
HDAC4-206ENST00000460235 TBC1D9Q6ZT07 1266 aa14.88□□□□□ -0.03
HDAC4-206ENST00000460235 FAM163AQ96GL9 167 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-206ENST00000460235 CDC45O75419 566 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 CYP7A1P22680 504 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 RBM5P52756 815 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDAC4-206ENST00000460235 KIAA0825Q8IV33 1275 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 PIH1D3Q9NQM4 214 aaKnown RBP14.87□□□□□ -0.03
HDAC4-206ENST00000460235 HELLSQ9NRZ9 838 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 JAG2Q9Y219 1238 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 MYH13Q9UKX3 1938 aa14.87□□□□□ -0.03
HDAC4-206ENST00000460235 SBF1O95248 1867 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
HDAC4-206ENST00000460235 PDE6AP16499 860 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 PRDX5P30044 214 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-206ENST00000460235 PRELPP51888 382 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 MECOMQ03112 1051 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 DLGAP5Q15398 846 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 MAGEB6Q8N7X4 407 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 APPBP2Q92624 585 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 NSUN4Q96CB9 384 aaKnown RBP14.86□□□□□ -0.03
HDAC4-206ENST00000460235 GMLQ99445 158 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 ANTXR1Q9H6X2 564 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 TMOD2Q9NZR1 351 aa14.86□□□□□ -0.03
HDAC4-206ENST00000460235 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
HDAC4-206ENST00000460235 F8W031 263 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-206ENST00000460235 GNAT2P19087 354 aa14.85□□□□□ -0.03
HDAC4-206ENST00000460235 ADD2P35612 726 aa14.85□□□□□ -0.03
HDAC4-206ENST00000460235 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
HDAC4-206ENST00000460235 AIDAQ96BJ3 306 aa14.85□□□□□ -0.03
HDAC4-206ENST00000460235 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-206ENST00000460235 RAD50Q92878 1312 aa14.85□□□□□ -0.03
HDAC4-206ENST00000460235 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 COL1A1P02452 1464 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-206ENST00000460235 CRKP46108 304 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 ZNF280AP59817 542 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-206ENST00000460235 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 PNMA8AQ86V59 439 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-206ENST00000460235 CERS5Q8N5B7 392 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 MTMR14Q8NCE2 650 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
HDAC4-206ENST00000460235 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 GPRC5DQ9NZD1 345 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 NDUFB9Q9Y6M9 179 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 ZNF532Q9HCE3 1301 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 AKAP11Q9UKA4 1901 aa14.84□□□□□ -0.03
HDAC4-206ENST00000460235 MAGEB6P1A0A0J9YX57 407 aa14.83□□□□□ -0.04
HDAC4-206ENST00000460235 DDNO94850 711 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-206ENST00000460235 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
HDAC4-206ENST00000460235 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.04
HDAC4-206ENST00000460235 MYOZ2Q9NPC6 264 aa14.83□□□□□ -0.04
HDAC4-206ENST00000460235 ADARB2Q9NS39 739 aaKnown RBP14.83□□□□□ -0.04
HDAC4-206ENST00000460235 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-206ENST00000460235 COL4A5P29400 1685 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 GPR75-ASB3A0A0A6YYF3 556 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 REC8O95072 547 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 CHMLP26374 656 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 PPP4CP60510 307 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 TNFAIP1Q13829 316 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 CFAP100Q494V2 611 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 ZMYM1Q5SVZ6 1142 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 GAKO14976 1311 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 PSME4Q14997 1843 aa14.82□□□□□ -0.04
HDAC4-206ENST00000460235 RPAP1Q9BWH6 1393 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-206ENST00000460235 VEGFAP15692 232 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-206ENST00000460235 TNNI2P48788 182 aa14.81□□□□□ -0.04
HDAC4-206ENST00000460235 SCNN1DP51172 638 aa14.81□□□□□ -0.04
HDAC4-206ENST00000460235 CWC27Q6UX04 472 aaKnown RBP14.81□□□□□ -0.04
HDAC4-206ENST00000460235 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-206ENST00000460235 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
HDAC4-206ENST00000460235 TCRBV5S4A2TA0A5A2 114 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 BTDP43251 543 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 DIXDC1Q155Q3 683 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 KIF4BQ2VIQ3 1234 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 SKAP1Q86WV1 359 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 ZC3H15Q8WU90 426 aaKnown RBP14.8□□□□□ -0.04
HDAC4-206ENST00000460235 DAGLAQ9Y4D2 1042 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 TIAM2Q8IVF5 1701 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 SCN9AQ15858 1988 aa14.8□□□□□ -0.04
HDAC4-206ENST00000460235 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
HDAC4-206ENST00000460235 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
HDAC4-206ENST00000460235 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
HDAC4-206ENST00000460235 NMIQ13287 307 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-206ENST00000460235 GIMAP6Q6P9H5 292 aa14.79□□□□□ -0.04
HDAC4-206ENST00000460235 UPF2Q9HAU5 1272 aaKnown RBP14.79□□□□□ -0.04
HDAC4-206ENST00000460235 ATP8A2Q9NTI2 1148 aa14.79□□□□□ -0.04
HDAC4-206ENST00000460235 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms