RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PTPDC1A2A3K4 754 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 SCRN1Q12765 414 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 PLEKHG2Q9H7P9 1386 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 CCDC69A6NI79 296 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 PRDX5P30044 214 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 ORC3Q9UBD5 711 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 KIF3AQ9Y496 699 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 SRCAPQ6ZRS2 3230 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 XRCC6P12956 609 aaKnown RBP eCLIP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 KRT85P78386 507 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 KLHL40Q2TBA0 621 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 CPLX2Q6PUV4 134 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 GAS2L3Q86XJ1 694 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
NUDCD3-203ENST00000460110 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 USP5P45974 858 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 PHKBQ93100 1093 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 FAM84BQ96KN1 310 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 SPATA32Q96LK8 384 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 MTMR6Q9Y217 621 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 AFDNP55196 1824 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 VIRMAQ69YN4 1812 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 PKD1L3Q7Z443 1732 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 ZSCAN23Q3MJ62 389 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 OLFM4Q6UX06 510 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 GPT2Q8TD30 523 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 SYAP1Q96A49 352 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 TBC1D10CQ8IV04 446 aa10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 STRBPQ96SI9 672 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-203ENST00000460110 PTMAP06454 111 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 UBE3CQ15386 1083 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 GTF3C6Q969F1 213 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 CNTNAP4Q9C0A0 1308 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 AHDC1Q5TGY3 1603 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 GOLGA8AA7E2F4 631 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 NASPP49321 788 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 PRR5LQ6MZQ0 368 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 C8orf76Q96K31 380 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 TMEM63CQ9P1W3 806 aa10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 SAP30BPQ9UHR5 308 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-203ENST00000460110 USP17L12C9JPN9 530 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 USP17L21D6R901 530 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 MBD3O95983 291 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 FGFR2P21802 821 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 RXRBP28702 533 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 ME1P48163 572 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 FTOQ9C0B1 505 aaKnown RBP eCLIP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 ANKRD2Q9GZV1 360 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 RIC1Q4ADV7 1423 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 AKAP17AQ02040 695 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 SENP2Q9HC62 589 aa10.96□□□□□ -0.65
NUDCD3-203ENST00000460110 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 MRE11P49959 708 aa10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 RBM5P52756 815 aaKnown RBP eCLIP10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 TRIM29Q14134 588 aa10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 DOK7Q18PE1 504 aa10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 AIFM3Q96NN9 605 aa10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 SLC26A6Q9BXS9 759 aa10.96□□□□□ -0.66
NUDCD3-203ENST00000460110 MMP10P09238 476 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ARID4AP29374 1257 aaPredicted RBP10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 CSPP1Q1MSJ5 1256 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ZBTB43O43298 467 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 LDHBP07195 334 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 GYS1P13807 737 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 FAM47AQ5JRC9 791 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ADGRA1Q86SQ6 560 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 LRP6O75581 1613 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ARFGEF2Q9Y6D5 1785 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 PICALMQ13492 652 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 CYB5R4Q7L1T6 521 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ZSWIM5Q9P217 1185 aa10.95□□□□□ -0.66
NUDCD3-203ENST00000460110 ATP2B2Q01814 1243 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 MECOMQ03112 1051 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 COL16A1Q07092 1604 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms