RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 CCT6AP40227 531 aaKnown RBP18.05■□□□□ 0.48
HDAC7-217ENST00000459625 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-217ENST00000459625 TBC1D7Q9P0N9 293 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 RAD51AP2Q09MP3 1159 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 NCAPH2Q6IBW4 605 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 METTL13Q8N6R0 699 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 V9GYY5 206 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CCNT1O60563 726 aaKnown RBP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 IL2RBP14784 551 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 KIF5AQ12840 1032 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 SF3A3Q12874 501 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 BTG4Q9NY30 223 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 NMIQ13287 307 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CTAGE1Q96RT6 745 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 LZTFL1Q9NQ48 299 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CTAGE15A4D2H0 777 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CTAGE8P0CG41 777 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 DTHD1Q6ZMT9 781 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CTAGE6Q86UF2 777 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 CTAGE4Q8IX94 777 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 LMBR1Q8WVP7 490 aa18.04■□□□□ 0.48
HDAC7-217ENST00000459625 IFT74Q96LB3 600 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 MED10Q9BTT4 135 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 RSPH14Q9UHP6 348 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 ZEB2O60315 1214 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 PLCG2P16885 1265 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 NSMFQ6X4W1 530 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 PPP1R12AO14974 1030 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-217ENST00000459625 CCDC129Q6ZRS4 1044 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 HMG20BQ9P0W2 317 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 MAN1A1P33908 653 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 CASC4Q6P4E1 433 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 VWA3AA6NCI4 1184 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 CCDC89Q8N998 374 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 CCDC42Q96M95 316 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 ARHGEF10LQ9HCE6 1279 aa18.03■□□□□ 0.48
HDAC7-217ENST00000459625 TACC3Q9Y6A5 838 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 TFCP2Q12800 502 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
HDAC7-217ENST00000459625 ARHGAP27Q6ZUM4 889 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 CACYBPQ9HB71 228 aaKnown RBP18.02■□□□□ 0.48
HDAC7-217ENST00000459625 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 SPOPO43791 374 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 SEL1L2Q5TEA6 688 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 PPP4R4Q6NUP7 873 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 SESTD1Q86VW0 696 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 DNAJC25Q9H1X3 360 aa18.02■□□□□ 0.48
HDAC7-217ENST00000459625 H0YIN7 160 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 STK25O00506 426 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 GIPC1O14908 333 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 APBA3O96018 575 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.47
HDAC7-217ENST00000459625 MEIS3Q99687 375 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 AZI2Q9H6S1 392 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 MAPK8IP1Q9UQF2 711 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 RTL9Q8NET4 1388 aa18.02■□□□□ 0.47
HDAC7-217ENST00000459625 RHOXF2BP0C7M4 288 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 MNAT1P51948 309 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 RSPH3Q86UC2 560 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 FMNL3Q8IVF7 1028 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 RHOXF2Q9BQY4 288 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 CTNND2Q9UQB3 1225 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 GRM8O00222 908 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 FAM98CQ17RN3 349 aaKnown RBP18.01■□□□□ 0.47
HDAC7-217ENST00000459625 TRAF5O00463 557 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 EPB41P11171 864 aaKnown RBP18.01■□□□□ 0.47
HDAC7-217ENST00000459625 SMTNP53814 917 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 JAKMIP2Q96AA8 810 aa18.01■□□□□ 0.47
HDAC7-217ENST00000459625 RIOK1Q9BRS2 568 aaKnown RBP18.01■□□□□ 0.47
HDAC7-217ENST00000459625 IDI1Q13907 227 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 GADL1Q6ZQY3 521 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 NSMCE1Q8WV22 266 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 ZFYP08048 801 aaPredicted RBP18■□□□□ 0.47
HDAC7-217ENST00000459625 SH2D4AQ9H788 454 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 SYT1P21579 422 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 ITIH3Q06033 890 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 ITKQ08881 620 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 KIF22Q14807 665 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
HDAC7-217ENST00000459625 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-217ENST00000459625 ZSCAN16Q9H4T2 348 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-217ENST00000459625 IRAK4Q9NWZ3 460 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 PRPF6O94906 941 aaKnown RBP17.99■□□□□ 0.47
HDAC7-217ENST00000459625 MBD4O95243 580 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 TTC30AQ86WT1 665 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 GNA11P29992 359 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms