RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SEC24BO95487 1268 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 PDE6AP16499 860 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 CHRNA5P30532 468 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 HSPA4P34932 840 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 ADD2P35612 726 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 USP5P45974 858 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 RBM5P52756 815 aaKnown RBP eCLIP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 MFSD14BQ5SR56 506 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 BLOC1S2Q6QNY1 142 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 NIM1KQ8IY84 436 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 LARGE2Q8N3Y3 721 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 TDRD7Q8NHU6 1098 aaKnown RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 MAP4K1Q92918 833 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 EDC3Q96F86 508 aaKnown RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 FAM227BQ96M60 508 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 TRIM34Q9BYJ4 488 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 RNF41Q9H4P4 317 aaPredicted RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 CNNM2Q9H8M5 875 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 CD209Q9NNX6 404 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 TOMM22Q9NS69 142 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 TMOD2Q9NZR1 351 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 BCS1LQ9Y276 419 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 NDUFB9Q9Y6M9 179 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 SLC4A4Q9Y6R1 1079 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZNF532Q9HCE3 1301 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 DUOX1Q9NRD9 1551 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 LRP5O75197 1615 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 MYO5AQ9Y4I1 1855 aaKnown RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 SLX4Q8IY92 1834 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 GPAA1O43292 621 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 MYO1BO43795 1136 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 ABCB7O75027 752 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 IL1R1P14778 569 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 DPEP1P16444 411 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 MMP14P50281 582 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 GTF2IP78347 998 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 TNIP1Q15025 636 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 SYNE3Q6ZMZ3 975 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 NCOA7Q8NI08 942 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZSCAN31Q96LW9 406 aaPredicted RBP6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 KRT23Q9C075 422 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 ANTXR1Q9H6X2 564 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 KIF3AQ9Y496 699 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 RBM8AQ9Y5S9 174 aaKnown RBP6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 MYO3BQ8WXR4 1341 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 SALL1Q9NSC2 1324 aa6.93□□□□□ -1.3
RNU1-88P-201ENST00000459274 DLEC1Q9Y238 1755 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 DOCK2Q92608 1830 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 A0A0D9SFI3 127 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 SNAP23O00161 211 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZBTB22O15209 634 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 MBD4O95243 580 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 HSPD1P10809 573 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 CASTP20810 708 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 EIF6P56537 245 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 PDE4BQ07343 736 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 SCARF1Q14162 830 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 MFSD6Q6ZSS7 791 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 TEKT1Q969V4 418 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 JAKMIP1Q96N16 626 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 NEK1Q96PY6 1258 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 PSMD1Q99460 953 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 TAOK3Q9H2K8 898 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 PIH1D3Q9NQM4 214 aaKnown RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 NAP1L2Q9ULW6 460 aaPredicted RBP6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 KIF13BQ9NQT8 1826 aa6.92□□□□□ -1.3
RNU1-88P-201ENST00000459274 LRRC37AA6NMS7 1700 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 K7ELQ4 463 aaPredicted RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 ECE2O60344 883 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 PCP11498 1178 aaKnown RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 MCM5P33992 734 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 NT5C2P49902 561 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 FKBP1AP62942 108 aaKnown RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 MECOMQ03112 1051 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 KIAA2012Q0VF49 1180 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 STRIP1Q5VSL9 837 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 CREB3L3Q68CJ9 461 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 CPLX2Q6PUV4 134 aaKnown RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 RUFY3Q7L099 469 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 TMTC2Q8N394 836 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 MIGA1Q8NAN2 632 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 SNX21Q969T3 373 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 RTFDC1Q9BY42 306 aaPredicted RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 LSG1Q9H089 658 aaKnown RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 CWC22Q9HCG8 908 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms