RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 HELLSQ9NRZ9 838 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 GEMIN8Q9NWZ8 242 aaKnown RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 NEDD4P46934 1319 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 PARP4Q9UKK3 1724 aaKnown RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 EVCP57679 992 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 CCDC93Q567U6 631 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 FILIP1Q7Z7B0 1213 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 CREBRFQ8IUR6 639 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 AOPEPQ8N6M6 819 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
VPS50-208ENST00000458707 PCDHA7Q9UN72 937 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 CARMIL3Q8ND23 1372 aa9.89□□□□□ -0.83
VPS50-208ENST00000458707 H2AFXP16104 143 aaPredicted RBP9.88□□□□□ -0.83
VPS50-208ENST00000458707 APOBRQ0VD83 1088 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 E4F1Q66K89 784 aaPredicted RBP9.88□□□□□ -0.83
VPS50-208ENST00000458707 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 CEP120Q8N960 986 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 ALS2Q96Q42 1657 aa9.88□□□□□ -0.83
VPS50-208ENST00000458707 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 IGSF3O75054 1194 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 CHGBP05060 677 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 ME1P48163 572 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 ELF2Q15723 593 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 POTEAQ6S8J7 498 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 XAGE3Q8WTP9 111 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS50-208ENST00000458707 MYD88Q99836 296 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 TRMT1Q9NXH9 659 aaKnown RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 COL18A1P39060 1754 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 E7EWF7 191 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 CLSTN1O94985 981 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 YEATS4O95619 227 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 FDPSP14324 419 aaKnown RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 CASP7P55210 303 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 ZMYM1Q5SVZ6 1142 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 ARMCX5Q6P1M9 558 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 COPS6Q7L5N1 327 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 LINC00301Q8NCQ3 95 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 ANKRD24Q8TF21 1146 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 PPP1R13BQ96KQ4 1090 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 GPR108Q9NPR9 543 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 POLR3EQ9NVU0 708 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 NDUFB9Q9Y6M9 179 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 SRCAPQ6ZRS2 3230 aa9.87□□□□□ -0.83
VPS50-208ENST00000458707 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
VPS50-208ENST00000458707 A0A087WWV3 80 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 DDX46Q7L014 1031 aaKnown RBP9.86□□□□□ -0.83
VPS50-208ENST00000458707 KCNG4Q8TDN1 519 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 XPO4Q9C0E2 1151 aaKnown RBP9.86□□□□□ -0.83
VPS50-208ENST00000458707 ZNF446Q9NWS9 450 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 AKAP11Q9UKA4 1901 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 MYO5AQ9Y4I1 1855 aaKnown RBP9.86□□□□□ -0.83
VPS50-208ENST00000458707 MST1RQ04912 1400 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 PLEKHG2Q9H7P9 1386 aa9.86□□□□□ -0.83
VPS50-208ENST00000458707 GCP02774 474 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 HSPD1P10809 573 aaKnown RBP9.85□□□□□ -0.83
VPS50-208ENST00000458707 NDUFA8P51970 172 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 NLRP12P59046 1061 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 CCT2P78371 535 aaKnown RBP9.85□□□□□ -0.83
VPS50-208ENST00000458707 PSME1Q06323 249 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 NCAPHQ15003 741 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 DPCR1Q3MIW9 517 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 NCOA5Q9HCD5 579 aaKnown RBP9.85□□□□□ -0.83
VPS50-208ENST00000458707 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS50-208ENST00000458707 V9GYY5 206 aaPredicted RBP9.85□□□□□ -0.83
VPS50-208ENST00000458707 PHLPP2Q6ZVD8 1323 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 A0A1B0GVL5 298 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 IKBKBO14920 756 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 CCP110O43303 1012 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 MYL6BP14649 208 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 SFPQP23246 707 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS50-208ENST00000458707 BMS1Q14692 1282 aaKnown RBP9.85□□□□□ -0.83
VPS50-208ENST00000458707 BRAPQ7Z569 592 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
VPS50-208ENST00000458707 MAST3O60307 1309 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 NRDCO43847 1150 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 FOSBP53539 338 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 TPM4P67936 248 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 ATG9AQ7Z3C6 839 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 UBE3BQ7Z3V4 1068 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 TMC6Q7Z403 805 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms