RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 AAMPQ13685 434 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 TNFAIP1Q13829 316 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 RASGRF1Q13972 1273 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 CLASRPQ8N2M8 674 aaKnown RBP19.82■□□□□ 0.76
CD28-203ENST00000458610 RHPN1Q8TCX5 695 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 CDCA5Q96FF9 252 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 TLL2Q9Y6L7 1015 aa19.82■□□□□ 0.76
CD28-203ENST00000458610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.82■□□□□ 0.76
CD28-203ENST00000458610 RASSF10A6NK89 507 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 ARID4AP29374 1257 aaPredicted RBP19.81■□□□□ 0.76
CD28-203ENST00000458610 FKBP1BP68106 108 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 SPATA5Q8NB90 893 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 HHIPL1Q96JK4 782 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 ZNF512BQ96KM6 892 aaPredicted RBP19.81■□□□□ 0.76
CD28-203ENST00000458610 ZDHHC15Q96MV8 337 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 DBNDD2Q9BQY9 259 aa19.81■□□□□ 0.76
CD28-203ENST00000458610 GBA2Q9HCG7 927 aaPredicted RBP19.81■□□□□ 0.76
CD28-203ENST00000458610 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
CD28-203ENST00000458610 IGSF3O75054 1194 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 ECE1P42892 770 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 TNNI2P48788 182 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 AACSQ86V21 672 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 EAF2Q96CJ1 260 aaPredicted RBP19.8■□□□□ 0.76
CD28-203ENST00000458610 VEZTQ9HBM0 779 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 TMOD2Q9NZR1 351 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 HMG20BQ9P0W2 317 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 ABCF2Q9UG63 623 aa19.8■□□□□ 0.76
CD28-203ENST00000458610 ZNF646O15015 1829 aaPredicted RBP19.8■□□□□ 0.76
CD28-203ENST00000458610 GRIK5Q16478 980 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 SPDYE2Q495Y8 402 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 SAPCD2Q86UD0 394 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 CCDC8Q9H0W5 538 aaPredicted RBP19.79■□□□□ 0.76
CD28-203ENST00000458610 DEFB129Q9H1M3 183 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
CD28-203ENST00000458610 CNTNAP1P78357 1384 aa19.79■□□□□ 0.76
CD28-203ENST00000458610 CLRN2A0PK11 232 aa19.78■□□□□ 0.76
CD28-203ENST00000458610 SUPT20HL1Q3ZLR7 823 aa19.78■□□□□ 0.76
CD28-203ENST00000458610 PAXIP1Q6ZW49 1069 aaPredicted RBP19.78■□□□□ 0.76
CD28-203ENST00000458610 DZIP1Q86YF9 867 aaKnown RBP19.78■□□□□ 0.76
CD28-203ENST00000458610 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
CD28-203ENST00000458610 PCDHAC2Q9Y5I4 1007 aa19.78■□□□□ 0.76
CD28-203ENST00000458610 APBB1O00213 710 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 LDHCP07864 332 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 IFIT2P09913 472 aaKnown RBP19.77■□□□□ 0.76
CD28-203ENST00000458610 PRDX5P30044 214 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 GSTO1P78417 241 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 DLK2Q6UY11 383 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 JMYQ8N9B5 988 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.76
CD28-203ENST00000458610 DBNLQ9UJU6 430 aaKnown RBP19.77■□□□□ 0.76
CD28-203ENST00000458610 COL1A1P02452 1464 aaPredicted RBP19.77■□□□□ 0.76
CD28-203ENST00000458610 HUNKP57058 714 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 FKBP1CQ5VVH2 108 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 CRBNQ96SW2 442 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 LRRCC1Q9C099 1032 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 DCTPP1Q9H773 170 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 LRP2BPQ9P2M1 347 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 ARAP2Q8WZ64 1704 aa19.76■□□□□ 0.75
CD28-203ENST00000458610 TRPM7Q96QT4 1865 aa19.75■□□□□ 0.75
CD28-203ENST00000458610 MCAMP43121 646 aa19.75■□□□□ 0.75
CD28-203ENST00000458610 VEGFBP49765 207 aa19.75■□□□□ 0.75
CD28-203ENST00000458610 TTLL12Q14166 644 aaPredicted RBP19.75■□□□□ 0.75
CD28-203ENST00000458610 APOBEC3HQ6NTF7 200 aaKnown RBP19.75■□□□□ 0.75
CD28-203ENST00000458610 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
CD28-203ENST00000458610 FAM163AQ96GL9 167 aaPredicted RBP19.75■□□□□ 0.75
CD28-203ENST00000458610 POLR2AP24928 1970 aaKnown RBP19.75■□□□□ 0.75
CD28-203ENST00000458610 PPP1R12BO60237 982 aaPredicted RBP19.74■□□□□ 0.75
CD28-203ENST00000458610 RASA3Q14644 834 aa19.74■□□□□ 0.75
CD28-203ENST00000458610 PRAMEF18Q5VWM3 479 aa19.74■□□□□ 0.75
CD28-203ENST00000458610 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
CD28-203ENST00000458610 CAPNS2Q96L46 248 aa19.74■□□□□ 0.75
CD28-203ENST00000458610 RAI14Q9P0K7 980 aa19.74■□□□□ 0.75
CD28-203ENST00000458610 SCAF8Q9UPN6 1271 aaKnown RBP19.74■□□□□ 0.75
CD28-203ENST00000458610 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
CD28-203ENST00000458610 DIXDC1Q155Q3 683 aa19.73■□□□□ 0.75
CD28-203ENST00000458610 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
CD28-203ENST00000458610 HOOK2Q96ED9 719 aa19.73■□□□□ 0.75
CD28-203ENST00000458610 SNRKQ9NRH2 765 aa19.73■□□□□ 0.75
CD28-203ENST00000458610 DAGLAQ9Y4D2 1042 aa19.73■□□□□ 0.75
CD28-203ENST00000458610 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
CD28-203ENST00000458610 TCP10L2B9ZVM9 353 aa19.72■□□□□ 0.75
CD28-203ENST00000458610 MAP4K4O95819 1239 aaPredicted RBP19.72■□□□□ 0.75
CD28-203ENST00000458610 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
CD28-203ENST00000458610 TBC1D9Q6ZT07 1266 aa19.72■□□□□ 0.75
CD28-203ENST00000458610 USP40Q9NVE5 1235 aa19.72■□□□□ 0.75
CD28-203ENST00000458610 TLR7Q9NYK1 1049 aaKnown RBP19.72■□□□□ 0.75
CD28-203ENST00000458610 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
CD28-203ENST00000458610 MYH13Q9UKX3 1938 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 MAP2K2P36507 400 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 MECOMQ03112 1051 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 CYP4F22Q6NT55 531 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 TMED8Q6PL24 325 aaPredicted RBP19.71■□□□□ 0.75
CD28-203ENST00000458610 PI16Q6UXB8 463 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
CD28-203ENST00000458610 NOL10Q9BSC4 688 aaKnown RBP19.71■□□□□ 0.75
CD28-203ENST00000458610 BCL11AQ9H165 835 aa19.71■□□□□ 0.75
CD28-203ENST00000458610 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
CD28-203ENST00000458610 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
CD28-203ENST00000458610 ZAP70P43403 619 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms