RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RBM25P49756 843 aaKnown RBP10.81□□□□□ -0.68
VPS50-207ENST00000458530 FKBP4Q02790 459 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS50-207ENST00000458530 CCDC93Q567U6 631 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 DBNDD2Q9BQY9 259 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 AKAP11Q9UKA4 1901 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 PDE8BO95263 885 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 TTC39AQ5SRH9 613 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
VPS50-207ENST00000458530 KIAA1211Q6ZU35 1233 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
VPS50-207ENST00000458530 LPIN2Q92539 896 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 HAUS7Q99871 368 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 FSD1Q9BTV5 496 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 PUS3Q9BZE2 481 aaKnown RBP10.8□□□□□ -0.68
VPS50-207ENST00000458530 TLR7Q9NYK1 1049 aaKnown RBP10.8□□□□□ -0.68
VPS50-207ENST00000458530 TAF1P21675 1872 aa10.8□□□□□ -0.68
VPS50-207ENST00000458530 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 STK25O00506 426 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 IFIT1P09914 478 aaKnown RBP10.79□□□□□ -0.68
VPS50-207ENST00000458530 UQCRFS1P1P0C7P4 283 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 EAPPQ56P03 285 aaPredicted RBP10.79□□□□□ -0.68
VPS50-207ENST00000458530 GPC2Q8N158 579 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
VPS50-207ENST00000458530 COL4A5P29400 1685 aa10.79□□□□□ -0.68
VPS50-207ENST00000458530 CACNA1SQ13698 1873 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
VPS50-207ENST00000458530 NPR1P16066 1061 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 VGLL2Q8N8G2 317 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 XAGE2Q96GT9 111 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 ZNF512BQ96KM6 892 aaPredicted RBP10.78□□□□□ -0.68
VPS50-207ENST00000458530 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 ANKRD2Q9GZV1 360 aa10.78□□□□□ -0.68
VPS50-207ENST00000458530 ZNF277Q9NRM2 450 aaPredicted RBP10.78□□□□□ -0.68
VPS50-207ENST00000458530 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
VPS50-207ENST00000458530 SGSM2O43147 1006 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 MAP2K2P36507 400 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 TIMM10P62072 90 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 TTF1Q15361 905 aaPredicted RBP10.77□□□□□ -0.69
VPS50-207ENST00000458530 CST9Q5W186 159 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 RTKN2Q8IZC4 609 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 RPGRQ92834 1020 aaKnown RBP10.77□□□□□ -0.69
VPS50-207ENST00000458530 PSMD1Q99460 953 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
VPS50-207ENST00000458530 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 ANO2Q9NQ90 1003 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 SEC31BQ9NQW1 1179 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 TLL2Q9Y6L7 1015 aa10.77□□□□□ -0.69
VPS50-207ENST00000458530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.77□□□□□ -0.69
VPS50-207ENST00000458530 LRRC37AA6NMS7 1700 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 CCDC85CA6NKD9 419 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 ZFYP08048 801 aaPredicted RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 IARSP41252 1262 aaKnown RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 SCNN1DP51172 638 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 ANAPC15P60006 121 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 RPS8P62241 208 aaKnown RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 FMR1Q06787 632 aaKnown RBP eCLIP10.76□□□□□ -0.694e-6■■■■□ 21.6
VPS50-207ENST00000458530 CHRNDQ07001 517 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 UBE4AQ14139 1066 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 RABEP1Q15276 862 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 ZSCAN25Q6NSZ9 544 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 TMC4Q7Z404 712 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 HSCBQ8IWL3 235 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 RBM17Q96I25 401 aaKnown RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 GPR101Q96P66 508 aaPredicted RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS50-207ENST00000458530 GNL3LQ9NVN8 582 aaKnown RBP10.76□□□□□ -0.69
VPS50-207ENST00000458530 DUOX1Q9NRD9 1551 aa10.76□□□□□ -0.69
VPS50-207ENST00000458530 CA12O43570 354 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 FGFR2P21802 821 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 ARID4AP29374 1257 aaPredicted RBP10.75□□□□□ -0.69
VPS50-207ENST00000458530 ECE1P42892 770 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 KCNJ4P48050 445 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 GRAPQ13588 217 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 CRY2Q49AN0 593 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 CWC27Q6UX04 472 aaKnown RBP10.75□□□□□ -0.69
VPS50-207ENST00000458530 GRAPLQ8TC17 118 aaPredicted RBP10.75□□□□□ -0.69
VPS50-207ENST00000458530 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 MCOLN1Q9GZU1 580 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 ABT1Q9ULW3 272 aaKnown RBP10.75□□□□□ -0.69
VPS50-207ENST00000458530 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
VPS50-207ENST00000458530 G3V3G9 751 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 GOLIM4O00461 696 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 ST18O60284 1047 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 CAVIN4Q5BKX8 364 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 TRPM7Q96QT4 1865 aa10.74□□□□□ -0.69
VPS50-207ENST00000458530 MYO5AQ9Y4I1 1855 aaKnown RBP10.74□□□□□ -0.69
VPS50-207ENST00000458530 ADORA1P30542 326 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 EPS15P42566 896 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms