RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 OTOP1Q7RTM1 612 aa18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 IRS2Q9Y4H2 1338 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 CLRN2A0PK11 232 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 SNAP23O00161 211 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 IL1R1P14778 569 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 FKBP1AP62942 108 aaKnown RBP18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 HELBQ8NG08 1087 aaPredicted RBP18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 PRMT6Q96LA8 375 aaPredicted RBP18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.52
UPF3AP2-201ENST00000457924 A0A1B0GUL6 1792 aa18.27■□□□□ 0.51
UPF3AP2-201ENST00000457924 TTLL13PA6NNM8 815 aa18.26■□□□□ 0.51
UPF3AP2-201ENST00000457924 RBM5P52756 815 aaKnown RBP eCLIP18.26■□□□□ 0.51
UPF3AP2-201ENST00000457924 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
UPF3AP2-201ENST00000457924 TMEM106CQ9BVX2 250 aa18.26■□□□□ 0.51
UPF3AP2-201ENST00000457924 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
UPF3AP2-201ENST00000457924 ANKRD13AQ8IZ07 590 aa18.25■□□□□ 0.51
UPF3AP2-201ENST00000457924 PTPN22Q9Y2R2 807 aa18.25■□□□□ 0.51
UPF3AP2-201ENST00000457924 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 CRHR2Q13324 411 aa18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 ASTLQ6HA08 431 aaPredicted RBP18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 JAG2Q9Y219 1238 aa18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 RBBP6Q7Z6E9 1792 aaKnown RBP18.24■□□□□ 0.51
UPF3AP2-201ENST00000457924 ATMINO43313 823 aaPredicted RBP18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 FOXO4P98177 505 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 RASA3Q14644 834 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 DCBLD2Q96PD2 775 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 EFCC1Q9HA90 598 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 IL16Q14005 1332 aa18.23■□□□□ 0.51
UPF3AP2-201ENST00000457924 PLIN1O60240 522 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 GJA5P36382 358 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 SP3Q02447 781 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 AOX1Q06278 1338 aa18.22■□□□□ 0.51
UPF3AP2-201ENST00000457924 OTOFQ9HC10 1997 aa18.21■□□□□ 0.51
UPF3AP2-201ENST00000457924 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
UPF3AP2-201ENST00000457924 LDHAL6AQ6ZMR3 332 aa18.21■□□□□ 0.51
UPF3AP2-201ENST00000457924 PTPN18Q99952 460 aa18.21■□□□□ 0.51
UPF3AP2-201ENST00000457924 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
UPF3AP2-201ENST00000457924 HABP4Q5JVS0 413 aaKnown RBP18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 OPTNQ96CV9 577 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 ELP3Q9H9T3 547 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 KIAA0100Q14667 2235 aaKnown RBP18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 FAM205AQ6ZU69 1335 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
UPF3AP2-201ENST00000457924 VAMP4O75379 141 aa18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 MFSD14BQ5SR56 506 aa18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 ZNF594Q96JF6 807 aaPredicted RBP18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 ZNF70Q9UC06 446 aaPredicted RBP18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 SERPINA10Q9UK55 444 aa18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 TTF2Q9UNY4 1162 aaKnown RBP18.19■□□□□ 0.5
UPF3AP2-201ENST00000457924 F6X3S4 739 aa18.18■□□□□ 0.5
UPF3AP2-201ENST00000457924 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
UPF3AP2-201ENST00000457924 STK25O00506 426 aa18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 EN2P19622 333 aaPredicted RBP18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 TNNI2P48788 182 aa18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 HS6ST3Q8IZP7 471 aa18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 TDRD7Q8NHU6 1098 aaKnown RBP18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 MS4A4AQ96JQ5 239 aa18.17■□□□□ 0.5
UPF3AP2-201ENST00000457924 ARAP2Q8WZ64 1704 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 GRM8O00222 908 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 GYG1P46976 350 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 GTF2A2P52657 109 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 TAF1CQ15572 869 aaPredicted RBP18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
UPF3AP2-201ENST00000457924 CCL15-CCL14A0A0B4J2E2 113 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 TCP10L2B9ZVM9 353 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 EXOSC9Q06265 439 aaKnown RBP18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 CCL15Q16663 113 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 CCDC184Q52MB2 194 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 BRI3BPQ8WY22 251 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 TEPSINQ96N21 525 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 CSADQ9Y600 493 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 HTTP42858 3142 aa18.15■□□□□ 0.5
UPF3AP2-201ENST00000457924 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 CRKP46108 304 aa18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 CAP1Q01518 475 aa18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 VGLL4Q14135 290 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms