RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 A0A1B0GVL5 298 aa18.81■□□□□ 0.6
LSS-205ENST00000457828 SKIDA1Q1XH10 827 aa18.81■□□□□ 0.6
LSS-205ENST00000457828 LARGE2Q8N3Y3 721 aa18.81■□□□□ 0.6
LSS-205ENST00000457828 MRPS27Q92552 414 aaKnown RBP18.81■□□□□ 0.6
LSS-205ENST00000457828 CCDC43Q96MW1 224 aaKnown RBP18.81■□□□□ 0.6
LSS-205ENST00000457828 NCOA5Q9HCD5 579 aaKnown RBP18.81■□□□□ 0.6
LSS-205ENST00000457828 ZBTB9Q96C00 473 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 ZFYP08048 801 aaPredicted RBP18.8■□□□□ 0.6
LSS-205ENST00000457828 HIBADHP31937 336 aaKnown RBP18.8■□□□□ 0.6
LSS-205ENST00000457828 PICALMQ13492 652 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 HSP90B2PQ58FF3 399 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
LSS-205ENST00000457828 SLU7O95391 586 aaKnown RBP18.8■□□□□ 0.6
LSS-205ENST00000457828 MIGA1Q8NAN2 632 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 EAF2Q96CJ1 260 aaPredicted RBP18.8■□□□□ 0.6
LSS-205ENST00000457828 FEZ1Q99689 392 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
LSS-205ENST00000457828 PUM3Q15397 648 aaKnown RBP18.79■□□□□ 0.6
LSS-205ENST00000457828 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 RNF41Q9H4P4 317 aaPredicted RBP18.79■□□□□ 0.6
LSS-205ENST00000457828 MST1RQ04912 1400 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
LSS-205ENST00000457828 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.61e-7■■■□□ 15.6
LSS-205ENST00000457828 PDE6BP35913 854 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 CTSWP56202 376 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 IFNKQ9P0W0 207 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 A0A087WWV3 80 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 SERPINB2P05120 415 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 PCCAP05165 728 aaPredicted RBP18.79■□□□□ 0.6
LSS-205ENST00000457828 C2CD5Q86YS7 1000 aa18.79■□□□□ 0.6
LSS-205ENST00000457828 LDHBP07195 334 aaKnown RBP18.78■□□□□ 0.6
LSS-205ENST00000457828 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
LSS-205ENST00000457828 PI4K2BQ8TCG2 481 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 ARHGAP23Q9P227 1491 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 SOGA3Q5TF21 947 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 SLC4A4Q9Y6R1 1079 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 SLIT1O75093 1534 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
LSS-205ENST00000457828 EN1Q05925 392 aaPredicted RBP18.78■□□□□ 0.6
LSS-205ENST00000457828 TNNI3KQ59H18 835 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 ANKRD20A12PQ8NF67 263 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 IL25Q9H293 177 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 FPGT-TNNI3KV9GXZ4 949 aa18.78■□□□□ 0.6
LSS-205ENST00000457828 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 PCMTD1Q96MG8 357 aaPredicted RBP18.77■□□□□ 0.6
LSS-205ENST00000457828 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 KLF18A0A0U1RQI7 1052 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 TSPY2A6NKD2 308 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 ELF2Q15723 593 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.6
LSS-205ENST00000457828 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.77■□□□□ 0.6
LSS-205ENST00000457828 KDRP35968 1356 aa18.77■□□□□ 0.6
LSS-205ENST00000457828 DHX8Q14562 1220 aaKnown RBP18.77■□□□□ 0.59
LSS-205ENST00000457828 TXNRD1Q16881 649 aa18.77■□□□□ 0.59
LSS-205ENST00000457828 KLHL10Q6JEL2 608 aa18.77■□□□□ 0.59
LSS-205ENST00000457828 MAGEB6Q8N7X4 407 aa18.77■□□□□ 0.59
LSS-205ENST00000457828 BMS1Q14692 1282 aaKnown RBP18.76■□□□□ 0.59
LSS-205ENST00000457828 GPR162Q16538 588 aa18.76■□□□□ 0.59
LSS-205ENST00000457828 PPFIBP1Q86W92 1011 aa18.76■□□□□ 0.59
LSS-205ENST00000457828 MYOM1P52179 1685 aa18.76■□□□□ 0.59
LSS-205ENST00000457828 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
LSS-205ENST00000457828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.76■□□□□ 0.59
LSS-205ENST00000457828 DCCP43146 1447 aa18.76■□□□□ 0.59
LSS-205ENST00000457828 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 PDE4BQ07343 736 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 IPO7O95373 1038 aaKnown RBP18.75■□□□□ 0.59
LSS-205ENST00000457828 UBASH3AP57075 661 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 CNNM3Q8NE01 707 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 CPLX3Q8WVH0 158 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 MMP10P09238 476 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 TAF3Q5VWG9 929 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 MFSD6Q6ZSS7 791 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
LSS-205ENST00000457828 SEC62Q99442 399 aaKnown RBP18.75■□□□□ 0.59
LSS-205ENST00000457828 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 CABP5Q9NP86 173 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 ZSCAN12O43309 604 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 GNG11P61952 73 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
LSS-205ENST00000457828 LPIN2Q92539 896 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 GREM2Q9H772 168 aa18.74■□□□□ 0.59
LSS-205ENST00000457828 TLR7Q9NYK1 1049 aaKnown RBP18.74■□□□□ 0.59
LSS-205ENST00000457828 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms