RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DCAF8Q5TAQ9 597 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 PPP1R42Q7Z4L9 355 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 RBM12BQ8IXT5 1001 aaKnown RBP7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 DRAXINQ8NBI3 349 aaPredicted RBP7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 CCDC191Q8NCU4 936 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 FBXO18Q8NFZ0 1043 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 SNX21Q969T3 373 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 SUCLG2Q96I99 432 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 LNPKQ9C0E8 428 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF446Q9NWS9 450 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 PCDHGA4Q9Y5G9 962 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 SALL3Q9BXA9 1300 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 CNTNAP4Q9C0A0 1308 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 ERVV-1B6SEH8 477 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 H7C1W4 665 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 MNX1P50219 401 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 TPM4P67936 248 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 TCIRG1Q13488 830 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RASA3Q14644 834 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 BMS1Q14692 1282 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 SF3A1Q15459 793 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RABL6Q3YEC7 729 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 ANKRD45Q5TZF3 282 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF280DQ6N043 979 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 GIGYF2Q6Y7W6 1299 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 LEKR1Q6ZMV7 388 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 TCP11Q8WWU5 503 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 FAXDC2Q96IV6 333 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 DRC1Q96MC2 740 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 SLX1AQ9BQ83 275 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 LZTS2Q9BRK4 669 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 FAM107BQ9H098 131 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 FRMD4BQ9Y2L6 1034 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 C4AP0C0L4 1744 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 C4BP0C0L5 1744 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 COL24A1Q17RW2 1714 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 UBR3Q6ZT12 1888 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RGPD3A6NKT7 1758 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RGPD4Q7Z3J3 1758 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 CASZ1Q86V15 1759 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 CRKLP46109 303 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 PSMC1P62191 440 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 NCBP1Q09161 790 aaKnown RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 GRIK3Q13003 919 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RAB3GAP1Q15042 981 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 GJC2Q5T442 439 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 PTF1AQ7RTS3 328 aa7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 RNF25Q96BH1 459 aaPredicted RBP7.94□□□□□ -1.14
CUBNP3-201ENST00000457461 DDX60Q8IY21 1712 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 AK9Q5TCS8 1911 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 A0A0G2JS52 829 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 SRGAP3O43295 1099 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 RAB11FIP3O75154 756 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 CDKL5O76039 1030 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 CRYMQ14894 314 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 RBBP5Q15291 538 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 BMP2KLQ5H9B9 411 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 RC3H1Q5TC82 1133 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 SYT10Q6XYQ8 523 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 KIF6Q6ZMV9 814 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 CCDC186Q7Z3E2 898 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 IQCGQ9H095 443 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 OSBPL3Q9H4L5 887 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 BICC1Q9H694 974 aaKnown RBP7.93□□□□□ -1.14
CUBNP3-201ENST00000457461 A0A087WZG4 1122 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 SMTNL1A8MU46 457 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 FAM163BP0C2L3 166 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 TEX11Q8IYF3 940 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 LINC00116Q8NCU8 138 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 PLA2G12BQ9BX93 195 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 EXOC6BQ9Y2D4 811 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 TNS1Q9HBL0 1735 aaKnown RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 LRP5O75197 1615 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 KIF2AO00139 706 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 CAMTA2O94983 1202 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 PCCAP05165 728 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 CHMLP26374 656 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 RFX5P48382 616 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 HLFQ16534 295 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 FAM196AQ6ZSG2 479 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 UBE3BQ7Z3V4 1068 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 TRIM74Q86UV6 250 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 TRIM73Q86UV7 250 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 NCAPG2Q86XI2 1143 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 C10orf67Q8IYJ2 551 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 LRRCC1Q9C099 1032 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 TOMM22Q9NS69 142 aa7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 UTP6Q9NYH9 597 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms