RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CRKP46108 304 aa28.55■■■□□ 2.16
CBX3-204ENST00000456948 HUNKP57058 714 aa28.55■■■□□ 2.16
CBX3-204ENST00000456948 FKBP1BP68106 108 aa28.55■■■□□ 2.16
CBX3-204ENST00000456948 COL13A1Q5TAT6 717 aaPredicted RBP28.55■■■□□ 2.16
CBX3-204ENST00000456948 ERC1Q8IUD2 1116 aa28.55■■■□□ 2.16
CBX3-204ENST00000456948 PRMT6Q96LA8 375 aaPredicted RBP28.55■■■□□ 2.16
CBX3-204ENST00000456948 ADORA1P30542 326 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 TNFAIP1Q13829 316 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 CYP4F22Q6NT55 531 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 CAPNS2Q96L46 248 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 ZBTB40Q9NUA8 1239 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 PPP2R3BQ9Y5P8 575 aa28.54■■■□□ 2.16
CBX3-204ENST00000456948 AIDAQ96BJ3 306 aa28.53■■■□□ 2.16
CBX3-204ENST00000456948 VEZTQ9HBM0 779 aa28.53■■■□□ 2.16
CBX3-204ENST00000456948 MYH13Q9UKX3 1938 aa28.53■■■□□ 2.16
CBX3-204ENST00000456948 LDHBP07195 334 aaKnown RBP28.51■■■□□ 2.15
CBX3-204ENST00000456948 CCDC158Q5M9N0 1113 aa28.51■■■□□ 2.15
CBX3-204ENST00000456948 SPTY2D1Q68D10 685 aaPredicted RBP28.51■■■□□ 2.15
CBX3-204ENST00000456948 DEFB129Q9H1M3 183 aa28.51■■■□□ 2.15
CBX3-204ENST00000456948 TMOD2Q9NZR1 351 aa28.51■■■□□ 2.15
CBX3-204ENST00000456948 PDS5AQ29RF7 1337 aaKnown RBP28.5■■■□□ 2.15
CBX3-204ENST00000456948 SALL1Q9NSC2 1324 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 ARAP2Q8WZ64 1704 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 CLRN2A0PK11 232 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 UQCRFS1P1P0C7P4 283 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 TNNI2P48788 182 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 TTLL12Q14166 644 aaPredicted RBP28.5■■■□□ 2.15
CBX3-204ENST00000456948 HHIPL2Q6UWX4 724 aa28.5■■■□□ 2.15
CBX3-204ENST00000456948 COL1A1P02452 1464 aaPredicted RBP28.5■■■□□ 2.15
CBX3-204ENST00000456948 FOXN1O15353 648 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 SUPT20HL1Q3ZLR7 823 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 TNNI3KQ59H18 835 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 SLF2Q8IX21 1173 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 CCDC102AQ96A19 550 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 ZDHHC15Q96MV8 337 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 SCAF8Q9UPN6 1271 aaKnown RBP28.49■■■□□ 2.15
CBX3-204ENST00000456948 FPGT-TNNI3KV9GXZ4 949 aa28.49■■■□□ 2.15
CBX3-204ENST00000456948 MAP2K2P36507 400 aa28.48■■■□□ 2.15
CBX3-204ENST00000456948 MAP2K1Q02750 393 aaPredicted RBP28.48■■■□□ 2.15
CBX3-204ENST00000456948 SPDYE2Q495Y8 402 aa28.48■■■□□ 2.15
CBX3-204ENST00000456948 RASGRF1Q13972 1273 aa28.47■■■□□ 2.15
CBX3-204ENST00000456948 RGMBQ6NW40 437 aa28.47■■■□□ 2.15
CBX3-204ENST00000456948 ARMC9Q7Z3E5 817 aa28.47■■■□□ 2.15
CBX3-204ENST00000456948 TDRD3Q9H7E2 651 aaKnown RBP28.47■■■□□ 2.15
CBX3-204ENST00000456948 WBP1LQ9NX94 342 aa28.47■■■□□ 2.15
CBX3-204ENST00000456948 ZNF70Q9UC06 446 aaPredicted RBP28.47■■■□□ 2.15
CBX3-204ENST00000456948 PCDHAC2Q9Y5I4 1007 aa28.47■■■□□ 2.15
CBX3-204ENST00000456948 ECM29Q5VYK3 1845 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 GRIK5Q16478 980 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 TTC39AQ5SRH9 613 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 C20orf194Q5TEA3 1177 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 PRAMEF18Q5VWM3 479 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 BEGAINQ9BUH8 593 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 ABCF2Q9UG63 623 aa28.46■■■□□ 2.15
CBX3-204ENST00000456948 ZNF157P51786 506 aaPredicted RBP28.45■■■□□ 2.14
CBX3-204ENST00000456948 PPP1R12BO60237 982 aaPredicted RBP28.44■■■□□ 2.14
CBX3-204ENST00000456948 AOC2O75106 756 aa28.44■■■□□ 2.14
CBX3-204ENST00000456948 NOGQ13253 232 aa28.44■■■□□ 2.14
CBX3-204ENST00000456948 DZIP1Q86YF9 867 aaKnown RBP28.44■■■□□ 2.14
CBX3-204ENST00000456948 SPATA5Q8NB90 893 aa28.44■■■□□ 2.14
CBX3-204ENST00000456948 EXOC6BQ9Y2D4 811 aa28.44■■■□□ 2.14
CBX3-204ENST00000456948 ARID4AP29374 1257 aaPredicted RBP28.43■■■□□ 2.14
CBX3-204ENST00000456948 CTCFP49711 727 aaPredicted RBP28.43■■■□□ 2.14
CBX3-204ENST00000456948 RASA3Q14644 834 aa28.43■■■□□ 2.14
CBX3-204ENST00000456948 ERICH6Q7L0X2 663 aa28.43■■■□□ 2.14
CBX3-204ENST00000456948 TNS4Q8IZW8 715 aa28.43■■■□□ 2.14
CBX3-204ENST00000456948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.43■■■□□ 2.14
CBX3-204ENST00000456948 RAB11FIP3O75154 756 aa28.42■■■□□ 2.14
CBX3-204ENST00000456948 PRDX5P30044 214 aa28.42■■■□□ 2.14
CBX3-204ENST00000456948 RRP1P56182 461 aaKnown RBP28.41■■■□□ 2.14
CBX3-204ENST00000456948 FKBP1CQ5VVH2 108 aa28.41■■■□□ 2.14
CBX3-204ENST00000456948 KIF1BPQ96EK5 621 aa28.41■■■□□ 2.14
CBX3-204ENST00000456948 HMG20BQ9P0W2 317 aa28.41■■■□□ 2.14
CBX3-204ENST00000456948 PAPPA2Q9BXP8 1791 aa28.41■■■□□ 2.14
CBX3-204ENST00000456948 TCP10L2B9ZVM9 353 aa28.4■■■□□ 2.14
CBX3-204ENST00000456948 APOBEC3HQ6NTF7 200 aaKnown RBP28.4■■■□□ 2.14
CBX3-204ENST00000456948 CLASRPQ8N2M8 674 aaKnown RBP28.4■■■□□ 2.14
CBX3-204ENST00000456948 HOOK2Q96ED9 719 aa28.4■■■□□ 2.14
CBX3-204ENST00000456948 ZNF512BQ96KM6 892 aaPredicted RBP28.4■■■□□ 2.14
CBX3-204ENST00000456948 DBNDD2Q9BQY9 259 aa28.4■■■□□ 2.14
CBX3-204ENST00000456948 GSTO1P78417 241 aa28.39■■■□□ 2.14
CBX3-204ENST00000456948 RHPN1Q8TCX5 695 aa28.39■■■□□ 2.14
CBX3-204ENST00000456948 UBE2Q2LH0YL09 131 aa28.38■■■□□ 2.13
CBX3-204ENST00000456948 LDHCP07864 332 aa28.38■■■□□ 2.13
CBX3-204ENST00000456948 LBX1P52954 281 aa28.38■■■□□ 2.13
CBX3-204ENST00000456948 ANGEL1Q9UNK9 670 aaKnown RBP28.38■■■□□ 2.13
CBX3-204ENST00000456948 UNCXA6NJT0 531 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 IGSF3O75054 1194 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 PRKG1Q13976 671 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 DIXDC1Q155Q3 683 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 FAM83AQ86UY5 434 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 AACSQ86V21 672 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 REM2Q8IYK8 340 aaPredicted RBP28.37■■■□□ 2.13
CBX3-204ENST00000456948 EAF2Q96CJ1 260 aaPredicted RBP28.37■■■□□ 2.13
CBX3-204ENST00000456948 CCDC8Q9H0W5 538 aaPredicted RBP28.37■■■□□ 2.13
CBX3-204ENST00000456948 LRP2BPQ9P2M1 347 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 DAGLAQ9Y4D2 1042 aa28.37■■■□□ 2.13
CBX3-204ENST00000456948 MCAMP43121 646 aa28.36■■■□□ 2.13
CBX3-204ENST00000456948 IREB2P48200 963 aaKnown RBP28.36■■■□□ 2.13
CBX3-204ENST00000456948 SIRT2Q8IXJ6 389 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms