RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
LMCD1-206ENST00000456506 ALDH1L1O75891 902 aa15.08■□□□□ 0
LMCD1-206ENST00000456506 NBPF7P0C2Y1 421 aaPredicted RBP15.08■□□□□ 0
LMCD1-206ENST00000456506 RABL6Q3YEC7 729 aaPredicted RBP15.08■□□□□ 0
LMCD1-206ENST00000456506 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0
LMCD1-206ENST00000456506 VGLL2Q8N8G2 317 aa15.08■□□□□ 0
LMCD1-206ENST00000456506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
LMCD1-206ENST00000456506 ERO1AQ96HE7 468 aa15.08■□□□□ 0
LMCD1-206ENST00000456506 MRS2Q9HD23 443 aa15.08■□□□□ 0
LMCD1-206ENST00000456506 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
LMCD1-206ENST00000456506 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 HIBADHP31937 336 aaKnown RBP15.07■□□□□ 0
LMCD1-206ENST00000456506 CRKP46108 304 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 RBM5P52756 815 aaKnown RBP eCLIP15.07■□□□□ 0
LMCD1-206ENST00000456506 VGLL4Q14135 290 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
LMCD1-206ENST00000456506 FBXO33Q7Z6M2 555 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 TMEM39BQ9GZU3 492 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 ELP3Q9H9T3 547 aa15.07■□□□□ 0
LMCD1-206ENST00000456506 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
LMCD1-206ENST00000456506 SP3Q02447 781 aa15.06■□□□□ 0
LMCD1-206ENST00000456506 TNFAIP1Q13829 316 aa15.06■□□□□ 0
LMCD1-206ENST00000456506 ANKRD44Q8N8A2 993 aa15.06■□□□□ 0
LMCD1-206ENST00000456506 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
LMCD1-206ENST00000456506 ZNF521Q96K83 1311 aa15.06■□□□□ 0
LMCD1-206ENST00000456506 HDLBPQ00341 1268 aaKnown RBP15.05■□□□□ -0
LMCD1-206ENST00000456506 LRRC24Q50LG9 513 aa15.05■□□□□ -0
LMCD1-206ENST00000456506 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
LMCD1-206ENST00000456506 FAM43AQ8N2R8 423 aa15.05■□□□□ -0
LMCD1-206ENST00000456506 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
LMCD1-206ENST00000456506 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
LMCD1-206ENST00000456506 TCP10L2B9ZVM9 353 aa15.04■□□□□ -0
LMCD1-206ENST00000456506 OTUD7BQ6GQQ9 843 aa15.04■□□□□ -0
LMCD1-206ENST00000456506 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
LMCD1-206ENST00000456506 BICC1Q9H694 974 aaKnown RBP15.04■□□□□ -0
LMCD1-206ENST00000456506 EFCC1Q9HA90 598 aa15.04■□□□□ -0
LMCD1-206ENST00000456506 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
LMCD1-206ENST00000456506 RPAP1Q9BWH6 1393 aaPredicted RBP15.03■□□□□ -0
LMCD1-206ENST00000456506 SPDYE5A6NIY4 337 aa15.03■□□□□ -0
LMCD1-206ENST00000456506 EN2P19622 333 aaPredicted RBP15.03■□□□□ -0
LMCD1-206ENST00000456506 MAP3K9P80192 1104 aa15.03■□□□□ -0
LMCD1-206ENST00000456506 ZNF333Q96JL9 665 aa15.03■□□□□ -0
LMCD1-206ENST00000456506 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
LMCD1-206ENST00000456506 DOCK1Q14185 1865 aa15.03■□□□□ -0
LMCD1-206ENST00000456506 KIF16BQ96L93 1317 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 ATAD5Q96QE3 1844 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 CCL15-CCL14A0A0B4J2E2 113 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 PDE8BO95263 885 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 FGFR2P21802 821 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
LMCD1-206ENST00000456506 CACNB3P54284 484 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 CCL15Q16663 113 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 APOBEC3HQ6NTF7 200 aaKnown RBP15.02■□□□□ -0
LMCD1-206ENST00000456506 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 MRIQ9BWK5 157 aa15.02■□□□□ -0
LMCD1-206ENST00000456506 GTF2A2P52657 109 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 FAM83AQ86UY5 434 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
LMCD1-206ENST00000456506 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
LMCD1-206ENST00000456506 CDK5RAP2Q96SN8 1893 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 RFX5P48382 616 aaPredicted RBP15□□□□□ -0.01
LMCD1-206ENST00000456506 TNNI2P48788 182 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 BCAMP50895 628 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 TAF1CQ15572 869 aaPredicted RBP15□□□□□ -0.01
LMCD1-206ENST00000456506 HABP4Q5JVS0 413 aaKnown RBP15□□□□□ -0.01
LMCD1-206ENST00000456506 FKBP1CQ5VVH2 108 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 TBC1D22AQ8WUA7 517 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 TEKT1Q969V4 418 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 ZCCHC17Q9NP64 241 aaKnown RBP15□□□□□ -0.01
LMCD1-206ENST00000456506 ALPK3Q96L96 1907 aa15□□□□□ -0.01
LMCD1-206ENST00000456506 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-206ENST00000456506 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 ZKSCAN4Q969J2 545 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-206ENST00000456506 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 ZFYVE28Q9HCC9 887 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 CSADQ9Y600 493 aa14.99□□□□□ -0.01
LMCD1-206ENST00000456506 ADGRA2Q96PE1 1338 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 BTBD19C9JJ37 291 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 IRF6O14896 467 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 TLR2O60603 784 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 CTGFP29279 349 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 HHIPL2Q6UWX4 724 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 ERO1BQ86YB8 467 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 SUGT1Q9Y2Z0 365 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 DOCK3Q8IZD9 2030 aa14.98□□□□□ -0.01
LMCD1-206ENST00000456506 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
LMCD1-206ENST00000456506 PPIL2Q13356 520 aa14.97□□□□□ -0.01
LMCD1-206ENST00000456506 MOGSQ13724 837 aa14.97□□□□□ -0.01
LMCD1-206ENST00000456506 CAVIN4Q5BKX8 364 aa14.97□□□□□ -0.01
LMCD1-206ENST00000456506 WRNIP1Q96S55 665 aa14.97□□□□□ -0.01
LMCD1-206ENST00000456506 LOC285556D6RIA3 1793 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms