RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SAMSN1Q9NSI8 373 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 RTEL1Q9NZ71 1219 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 CEP83Q9Y592 693 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 TTC41PQ6P2S7 1318 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 ADAMTS3O15072 1205 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 LGR5O75473 907 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 FANCCQ00597 558 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SHC4Q6S5L8 630 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 CHP1Q99653 195 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 KAT14Q9H8E8 782 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 LGR6Q9HBX8 967 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SMARCAL1Q9NZC9 954 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 EHD2Q9NZN4 543 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 PPP2R2CQ9Y2T4 447 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SAMM50Q9Y512 469 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 MYH15Q9Y2K3 1946 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 CPSF1Q10570 1443 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 MYO5BQ9ULV0 1848 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 ABCC1P33527 1531 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 EFCAB8A8MWE9 144 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 RAPGEF3O95398 923 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 CCAR1Q8IX12 1150 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 IGSF22Q8N9C0 903 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 FAM204AQ9H8W3 233 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 INCENPQ9NQS7 918 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 MED23Q9ULK4 1368 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SSH2Q76I76 1423 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 EIF2S2P20042 333 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 MARCKSP29966 332 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SEC24CP53992 1094 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 PPP2R3AQ06190 1150 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SAMD1Q6SPF0 538 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 ARFGAP3Q9NP61 516 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 PICK1Q9NRD5 415 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 DDX19AQ9NUU7 478 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 ENC1O14682 589 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 RPS6KA5O75582 802 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 CCT5P48643 541 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 BEND3Q5T5X7 828 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 SPIRE2Q8WWL2 714 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 NLRP3Q96P20 1036 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 EYA1Q99502 592 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 PSD3Q9NYI0 1048 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 EFCAB6Q5THR3 1501 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 DCHS1Q96JQ0 3298 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 LMTK2Q8IWU2 1503 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 ZNF18P17022 549 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 SFPQP23246 707 aaKnown RBP eCLIP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 ACTN3Q08043 901 aaPredicted RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 NOM1Q5C9Z4 860 aaKnown RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 GPIHBP1Q8IV16 184 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 FSIP1Q8NA03 581 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 TSEN2Q8NCE0 465 aaKnown RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 MTRQ99707 1265 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 MTFR1LQ9H019 292 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 SLC24A3Q9HC58 644 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 DBNLQ9UJU6 430 aaKnown RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 SUFUQ9UMX1 484 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 POGZQ7Z3K3 1410 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 DNM1LO00429 736 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 CPP00450 1065 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 CCDC172P0C7W6 258 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 CDC25BP30305 580 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 USP5P45974 858 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 USPL1Q5W0Q7 1092 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 JPH2Q9BR39 696 aaPredicted RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 SNRKQ9NRH2 765 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 PPLO60437 1756 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 ZNF609O15014 1411 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 A0A087X0B3 334 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 OPLAHO14841 1288 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 KRT14P02533 472 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 PIP4K2AP48426 406 aaPredicted RBP5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 CCDC158Q5M9N0 1113 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 TADA2BQ86TJ2 420 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 ACRBPQ8NEB7 543 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 OSBPL7Q9BZF2 842 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 ADGRG1Q9Y653 693 aa5.25□□□□□ -1.57
DEPDC1-202ENST00000456315 LMTK3Q96Q04 1460 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 ATP7AQ04656 1500 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 LAMA4Q16363 1823 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 VEGFAP15692 232 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 CD44P16070 742 aaKnown RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 RPS6KB1P23443 525 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 TNNT3P45378 269 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 NAIF1Q69YI7 327 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 PROSER2Q86WR7 435 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 HOMER1Q86YM7 354 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 SUGP1Q8IWZ8 645 aaKnown RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 DONSONQ9NYP3 566 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 CYP46A1Q9Y6A2 500 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 TACC3Q9Y6A5 838 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 GON4LQ3T8J9 2241 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 KIF24Q5T7B8 1368 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 ZNF185O15231 689 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 TDO2P48775 406 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 ERVK-24P63145 666 aa5.24□□□□□ -1.57
DEPDC1-202ENST00000456315 Q6ZUG5 572 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms