RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 IVLP07476 585 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 HCLS1P14317 486 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-218ENST00000456174 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-218ENST00000456174 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 PTF1AQ7RTS3 328 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 TMEM87AQ8NBN3 555 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 ANKRD20A12PQ8NF67 263 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 EVI5LQ96CN4 794 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 ANO2Q9NQ90 1003 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
HDAC9-218ENST00000456174 CCDC171Q6TFL3 1326 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 BCORQ6W2J9 1755 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 RPS6KA5O75582 802 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 SLU7O95391 586 aaKnown RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 PTGS1P23219 599 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 ST5P78524 1137 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 LRRC24Q50LG9 513 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 ZGPATQ8N5A5 531 aaKnown RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 TBC1D22AQ8WUA7 517 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 ATRNO75882 1429 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 IRS4O14654 1257 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 CIAO1O76071 339 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 SSR1P43307 286 aaKnown RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 CLCN6P51797 869 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 MAP9Q49MG5 647 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 LINC00116Q8NCU8 138 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 AK7Q96M32 723 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 PUS3Q9BZE2 481 aaKnown RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 IL25Q9H293 177 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 BOLA2Q9H3K6 86 aa8.87□□□□□ -0.99
HDAC9-218ENST00000456174 TRPC5Q9UL62 973 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-218ENST00000456174 SGSM2O43147 1006 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 ATP5JP18859 108 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 KCNQ4P56696 695 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 CWC27Q6UX04 472 aaKnown RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 CHAMP1Q96JM3 812 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 GPR108Q9NPR9 543 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 LY75O60449 1722 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 TAF1LQ8IZX4 1826 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 KIF2AO00139 706 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 ACTN2P35609 894 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 CTSWP56202 376 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 CORO7P57737 925 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 NBPF5PQ86XG9 351 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 REXO1L1PQ8IX06 675 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 RUFY2Q8WXA3 655 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
HDAC9-218ENST00000456174 ZSCAN16Q9H4T2 348 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-218ENST00000456174 ELP1O95163 1332 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 EPB41L2O43491 1005 aaKnown RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 PDE8AO60658 829 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 E2F4Q16254 413 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 TPD52L1Q16890 204 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 SUSD4Q5VX71 490 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 GREM2Q9H772 168 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 LAMB2P55268 1798 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 ZNF609O15014 1411 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 EIF3CLB5ME19 914 aaKnown RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 HIP1O00291 1037 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 C21orf2O43822 256 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 ITGA6P23229 1130 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 TIMM10P62072 90 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 SETQ01105 290 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 PARP10Q53GL7 1025 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 SPC24Q8NBT2 197 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 FSD1Q9BTV5 496 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 UTP14AQ9BVJ6 771 aaKnown RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 QTRT2Q9H974 415 aaKnown RBP8.85□□□□□ -0.99
HDAC9-218ENST00000456174 KCND1Q9NSA2 647 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
HDAC9-218ENST00000456174 CNTNAP4Q9C0A0 1308 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 ANKRD18BA2A2Z9 1011 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 ST18O60284 1047 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 GADD45BO75293 160 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-218ENST00000456174 ANAPC15P60006 121 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 ZSCAN25Q6NSZ9 544 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 L2HGDHQ9H9P8 463 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 NIP7Q9Y221 180 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC9-218ENST00000456174 SH3TC1Q8TE82 1336 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 SCN7AQ01118 1682 aa8.84□□□□□ -0.99
HDAC9-218ENST00000456174 CASZ1Q86V15 1759 aa8.84□□□□□ -1
HDAC9-218ENST00000456174 POLR3GO15318 223 aaPredicted RBP8.83□□□□□ -1
HDAC9-218ENST00000456174 RC3H1Q5TC82 1133 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms