RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
COL20A1-204ENST00000455906 CDAN1Q8IWY9 1227 aa23.57■■□□□ 1.36
COL20A1-204ENST00000455906 USP44Q9H0E7 712 aa23.57■■□□□ 1.36
COL20A1-204ENST00000455906 IQSEC3Q9UPP2 1182 aaPredicted RBP23.57■■□□□ 1.36
COL20A1-204ENST00000455906 PDE8BO95263 885 aa23.56■■□□□ 1.36
COL20A1-204ENST00000455906 TNFAIP1Q13829 316 aa23.56■■□□□ 1.36
COL20A1-204ENST00000455906 KLHDC4Q8TBB5 520 aa23.56■■□□□ 1.36
COL20A1-204ENST00000455906 TEPSINQ96N21 525 aa23.56■■□□□ 1.36
COL20A1-204ENST00000455906 CENPFP49454 3210 aa23.56■■□□□ 1.36
COL20A1-204ENST00000455906 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
COL20A1-204ENST00000455906 FBXO46Q6PJ61 603 aaPredicted RBP23.55■■□□□ 1.36
COL20A1-204ENST00000455906 VPS37DQ86XT2 251 aa23.55■■□□□ 1.36
COL20A1-204ENST00000455906 ANKRD13AQ8IZ07 590 aa23.55■■□□□ 1.36
COL20A1-204ENST00000455906 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
COL20A1-204ENST00000455906 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
COL20A1-204ENST00000455906 TMEM39BQ9GZU3 492 aa23.53■■□□□ 1.36
COL20A1-204ENST00000455906 TCP10L2B9ZVM9 353 aa23.52■■□□□ 1.36
COL20A1-204ENST00000455906 SLC34A2O95436 690 aa23.52■■□□□ 1.36
COL20A1-204ENST00000455906 FGFR2P21802 821 aa23.52■■□□□ 1.36
COL20A1-204ENST00000455906 BCAMP50895 628 aa23.52■■□□□ 1.36
COL20A1-204ENST00000455906 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
COL20A1-204ENST00000455906 TBC1D22AQ8WUA7 517 aa23.52■■□□□ 1.36
COL20A1-204ENST00000455906 TESPA1A2RU30 521 aaPredicted RBP23.51■■□□□ 1.35
COL20A1-204ENST00000455906 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
COL20A1-204ENST00000455906 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.51■■□□□ 1.35
COL20A1-204ENST00000455906 PTPN18Q99952 460 aa23.51■■□□□ 1.35
COL20A1-204ENST00000455906 ELP3Q9H9T3 547 aa23.51■■□□□ 1.35
COL20A1-204ENST00000455906 KIF16BQ96L93 1317 aa23.51■■□□□ 1.35
COL20A1-204ENST00000455906 ALDH1L2Q3SY69 923 aa23.5■■□□□ 1.35
COL20A1-204ENST00000455906 OPTNQ96CV9 577 aa23.5■■□□□ 1.35
COL20A1-204ENST00000455906 CDCA7LQ96GN5 454 aa23.5■■□□□ 1.35
COL20A1-204ENST00000455906 MYH13Q9UKX3 1938 aa23.49■■□□□ 1.35
COL20A1-204ENST00000455906 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
COL20A1-204ENST00000455906 TNNI2P48788 182 aa23.49■■□□□ 1.35
COL20A1-204ENST00000455906 CRHR2Q13324 411 aa23.49■■□□□ 1.35
COL20A1-204ENST00000455906 PUM3Q15397 648 aaKnown RBP23.49■■□□□ 1.35
COL20A1-204ENST00000455906 TEKT1Q969V4 418 aa23.49■■□□□ 1.35
COL20A1-204ENST00000455906 BRCA2P51587 3418 aa23.49■■□□□ 1.35
COL20A1-204ENST00000455906 CACNB3P54284 484 aa23.48■■□□□ 1.35
COL20A1-204ENST00000455906 OTOP1Q7RTM1 612 aa23.48■■□□□ 1.35
COL20A1-204ENST00000455906 TRMT2AQ8IZ69 625 aaKnown RBP23.48■■□□□ 1.35
COL20A1-204ENST00000455906 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
COL20A1-204ENST00000455906 MS4A4AQ96JQ5 239 aa23.48■■□□□ 1.35
COL20A1-204ENST00000455906 MRIQ9BWK5 157 aa23.48■■□□□ 1.35
COL20A1-204ENST00000455906 MKI67P46013 3256 aaKnown RBP23.48■■□□□ 1.35
COL20A1-204ENST00000455906 EYA2O00167 538 aa23.47■■□□□ 1.35
COL20A1-204ENST00000455906 VGLL4Q14135 290 aa23.47■■□□□ 1.35
COL20A1-204ENST00000455906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.47■■□□□ 1.35
COL20A1-204ENST00000455906 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
COL20A1-204ENST00000455906 SUGT1Q9Y2Z0 365 aa23.47■■□□□ 1.35
COL20A1-204ENST00000455906 TRIM17Q9Y577 477 aa23.47■■□□□ 1.35
COL20A1-204ENST00000455906 IFIT1P09914 478 aaKnown RBP23.46■■□□□ 1.35
COL20A1-204ENST00000455906 MAP3K9P80192 1104 aa23.46■■□□□ 1.35
COL20A1-204ENST00000455906 OTUD7BQ6GQQ9 843 aa23.46■■□□□ 1.35
COL20A1-204ENST00000455906 APOBEC3HQ6NTF7 200 aaKnown RBP23.46■■□□□ 1.35
COL20A1-204ENST00000455906 ATG9AQ7Z3C6 839 aa23.46■■□□□ 1.35
COL20A1-204ENST00000455906 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
COL20A1-204ENST00000455906 FKBP1CQ5VVH2 108 aa23.44■■□□□ 1.34
COL20A1-204ENST00000455906 FAM83AQ86UY5 434 aa23.44■■□□□ 1.34
COL20A1-204ENST00000455906 CD99L2Q8TCZ2 262 aa23.44■■□□□ 1.34
COL20A1-204ENST00000455906 BRI3BPQ8WY22 251 aa23.44■■□□□ 1.34
COL20A1-204ENST00000455906 LPIN2Q92539 896 aa23.44■■□□□ 1.34
COL20A1-204ENST00000455906 MAST3O60307 1309 aa23.43■■□□□ 1.34
COL20A1-204ENST00000455906 SLC5A1P13866 664 aa23.43■■□□□ 1.34
COL20A1-204ENST00000455906 CAP1Q01518 475 aa23.43■■□□□ 1.34
COL20A1-204ENST00000455906 HHIPL2Q6UWX4 724 aa23.43■■□□□ 1.34
COL20A1-204ENST00000455906 ERO1AQ96HE7 468 aa23.43■■□□□ 1.34
COL20A1-204ENST00000455906 TMOD2Q9NZR1 351 aa23.42■■□□□ 1.34
COL20A1-204ENST00000455906 CSADQ9Y600 493 aa23.42■■□□□ 1.34
COL20A1-204ENST00000455906 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 SPDYE5A6NIY4 337 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 GTF2A2P52657 109 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 SP3Q02447 781 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 CCL15Q16663 113 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 WDR66Q8TBY9 1149 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 OTUD5Q96G74 571 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 PTPN22Q9Y2R2 807 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 SNCAIPQ9Y6H5 919 aa23.41■■□□□ 1.34
COL20A1-204ENST00000455906 RPAP1Q9BWH6 1393 aaPredicted RBP23.4■■□□□ 1.34
COL20A1-204ENST00000455906 UBTFL1P0CB47 393 aaPredicted RBP23.4■■□□□ 1.34
COL20A1-204ENST00000455906 SIL1Q9H173 461 aa23.4■■□□□ 1.34
COL20A1-204ENST00000455906 FBXO3Q9UK99 471 aa23.4■■□□□ 1.34
COL20A1-204ENST00000455906 NOB1Q9ULX3 412 aaKnown RBP23.4■■□□□ 1.34
COL20A1-204ENST00000455906 KIAA0100Q14667 2235 aaKnown RBP23.4■■□□□ 1.34
COL20A1-204ENST00000455906 CIAO1O76071 339 aa23.39■■□□□ 1.33
COL20A1-204ENST00000455906 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
COL20A1-204ENST00000455906 FAM43AQ8N2R8 423 aa23.39■■□□□ 1.33
COL20A1-204ENST00000455906 WRNIP1Q96S55 665 aa23.39■■□□□ 1.33
COL20A1-204ENST00000455906 RBBP6Q7Z6E9 1792 aaKnown RBP23.38■■□□□ 1.33
COL20A1-204ENST00000455906 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
COL20A1-204ENST00000455906 PRPF38BQ5VTL8 546 aaKnown RBP23.38■■□□□ 1.33
COL20A1-204ENST00000455906 ERO1BQ86YB8 467 aa23.38■■□□□ 1.33
COL20A1-204ENST00000455906 ZKSCAN4Q969J2 545 aaPredicted RBP23.38■■□□□ 1.33
COL20A1-204ENST00000455906 EFCC1Q9HA90 598 aa23.38■■□□□ 1.33
COL20A1-204ENST00000455906 PRDX5P30044 214 aa23.37■■□□□ 1.33
COL20A1-204ENST00000455906 TAF1CQ15572 869 aaPredicted RBP23.37■■□□□ 1.33
COL20A1-204ENST00000455906 DIXDC1Q155Q3 683 aa23.37■■□□□ 1.33
COL20A1-204ENST00000455906 HOOK2Q96ED9 719 aa23.37■■□□□ 1.33
COL20A1-204ENST00000455906 DAGLAQ9Y4D2 1042 aa23.37■■□□□ 1.33
COL20A1-204ENST00000455906 LRRFIP2Q9Y608 721 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms