RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SERPINA10Q9UK55 444 aa29.55■■■□□ 2.32
PTPRA-208ENST00000455631 CSADQ9Y600 493 aa29.55■■■□□ 2.32
PTPRA-208ENST00000455631 CACNA1FO60840 1977 aa29.54■■■□□ 2.32
PTPRA-208ENST00000455631 ZNF594Q96JF6 807 aaPredicted RBP29.54■■■□□ 2.32
PTPRA-208ENST00000455631 TMEM39BQ9GZU3 492 aa29.54■■■□□ 2.32
PTPRA-208ENST00000455631 CNNM1Q9NRU3 951 aa29.54■■■□□ 2.32
PTPRA-208ENST00000455631 MAP3K9P80192 1104 aa29.53■■■□□ 2.32
PTPRA-208ENST00000455631 LDHAL6AQ6ZMR3 332 aa29.53■■■□□ 2.32
PTPRA-208ENST00000455631 DZIP1LQ8IYY4 767 aaKnown RBP29.53■■■□□ 2.32
PTPRA-208ENST00000455631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.53■■■□□ 2.32
PTPRA-208ENST00000455631 TNNI2P48788 182 aa29.52■■■□□ 2.32
PTPRA-208ENST00000455631 CCDC57Q2TAC2 916 aa29.52■■■□□ 2.32
PTPRA-208ENST00000455631 LMBR1LQ6UX01 489 aa29.52■■■□□ 2.32
PTPRA-208ENST00000455631 SH3TC2Q8TF17 1288 aa29.52■■■□□ 2.32
PTPRA-208ENST00000455631 H0YGN5 161 aa29.51■■■□□ 2.31
PTPRA-208ENST00000455631 WDHD1O75717 1129 aaPredicted RBP29.51■■■□□ 2.31
PTPRA-208ENST00000455631 TDRD7Q8NHU6 1098 aaKnown RBP29.51■■■□□ 2.31
PTPRA-208ENST00000455631 ARHGAP39Q9C0H5 1083 aa29.51■■■□□ 2.31
PTPRA-208ENST00000455631 CRKP46108 304 aa29.5■■■□□ 2.31
PTPRA-208ENST00000455631 GYG1P46976 350 aa29.5■■■□□ 2.31
PTPRA-208ENST00000455631 KIF22Q14807 665 aa29.5■■■□□ 2.31
PTPRA-208ENST00000455631 WWC1Q8IX03 1113 aa29.49■■■□□ 2.31
PTPRA-208ENST00000455631 HIBADHP31937 336 aaKnown RBP29.48■■■□□ 2.31
PTPRA-208ENST00000455631 CCDC27Q2M243 656 aa29.48■■■□□ 2.31
PTPRA-208ENST00000455631 EPHA10Q5JZY3 1008 aa29.48■■■□□ 2.31
PTPRA-208ENST00000455631 SPDYE5A6NIY4 337 aa29.47■■■□□ 2.31
PTPRA-208ENST00000455631 F6X3S4 739 aa29.47■■■□□ 2.31
PTPRA-208ENST00000455631 TLR2O60603 784 aa29.47■■■□□ 2.31
PTPRA-208ENST00000455631 LACTBP83111 547 aaPredicted RBP29.47■■■□□ 2.31
PTPRA-208ENST00000455631 CETPP11597 493 aa29.46■■■□□ 2.31
PTPRA-208ENST00000455631 BEND3Q5T5X7 828 aa29.46■■■□□ 2.31
PTPRA-208ENST00000455631 UBE4AQ14139 1066 aa29.45■■■□□ 2.31
PTPRA-208ENST00000455631 SNCAIPQ9Y6H5 919 aa29.45■■■□□ 2.31
PTPRA-208ENST00000455631 FANCIQ9NVI1 1328 aa29.45■■■□□ 2.3
PTPRA-208ENST00000455631 TRIOBPQ9H2D6 2365 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 BTBD19C9JJ37 291 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 ECM2O94769 699 aaPredicted RBP29.44■■■□□ 2.3
PTPRA-208ENST00000455631 CACNB3P54284 484 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 CHRDL2Q6WN34 429 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 FAM84BQ96KN1 310 aaPredicted RBP29.44■■■□□ 2.3
PTPRA-208ENST00000455631 WRNIP1Q96S55 665 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 ZCCHC17Q9NP64 241 aaKnown RBP29.44■■■□□ 2.3
PTPRA-208ENST00000455631 IL16Q14005 1332 aa29.44■■■□□ 2.3
PTPRA-208ENST00000455631 GRM8O00222 908 aa29.43■■■□□ 2.3
PTPRA-208ENST00000455631 ERO1BQ86YB8 467 aa29.43■■■□□ 2.3
PTPRA-208ENST00000455631 CEP290O15078 2479 aa29.43■■■□□ 2.3
PTPRA-208ENST00000455631 GNRH1P01148 92 aa29.42■■■□□ 2.3
PTPRA-208ENST00000455631 SNAPC2Q13487 334 aa29.42■■■□□ 2.3
PTPRA-208ENST00000455631 GRIK5Q16478 980 aa29.42■■■□□ 2.3
PTPRA-208ENST00000455631 IRF6O14896 467 aa29.41■■■□□ 2.3
PTPRA-208ENST00000455631 CHAF1AQ13111 956 aaPredicted RBP29.41■■■□□ 2.3
PTPRA-208ENST00000455631 ZKSCAN4Q969J2 545 aaPredicted RBP29.41■■■□□ 2.3
PTPRA-208ENST00000455631 IQSEC3Q9UPP2 1182 aaPredicted RBP29.41■■■□□ 2.3
PTPRA-208ENST00000455631 PRMT2P55345 433 aa29.4■■■□□ 2.3
PTPRA-208ENST00000455631 VPS37DQ86XT2 251 aa29.4■■■□□ 2.3
PTPRA-208ENST00000455631 TMOD2Q9NZR1 351 aa29.4■■■□□ 2.3
PTPRA-208ENST00000455631 VAMP4O75379 141 aa29.39■■■□□ 2.3
PTPRA-208ENST00000455631 DPF3Q92784 378 aa29.39■■■□□ 2.3
PTPRA-208ENST00000455631 TEKT1Q969V4 418 aa29.39■■■□□ 2.3
PTPRA-208ENST00000455631 SHISA4Q96DD7 197 aa29.39■■■□□ 2.3
PTPRA-208ENST00000455631 PUS3Q9BZE2 481 aaKnown RBP29.39■■■□□ 2.3
PTPRA-208ENST00000455631 C9orf78Q9NZ63 289 aaPredicted RBP29.39■■■□□ 2.3
PTPRA-208ENST00000455631 PPIL2Q13356 520 aa29.38■■■□□ 2.29
PTPRA-208ENST00000455631 MTFR1Q15390 333 aa29.38■■■□□ 2.29
PTPRA-208ENST00000455631 FRAT2O75474 233 aaPredicted RBP29.37■■■□□ 2.29
PTPRA-208ENST00000455631 HDLBPQ00341 1268 aaKnown RBP29.37■■■□□ 2.29
PTPRA-208ENST00000455631 HOOK2Q96ED9 719 aa29.37■■■□□ 2.29
PTPRA-208ENST00000455631 CPA4Q9UI42 421 aa29.37■■■□□ 2.29
PTPRA-208ENST00000455631 TBC1D22AQ8WUA7 517 aa29.36■■■□□ 2.29
PTPRA-208ENST00000455631 RBM27Q9P2N5 1060 aaKnown RBP29.36■■■□□ 2.29
PTPRA-208ENST00000455631 SRRDQ9UH36 339 aa29.35■■■□□ 2.29
PTPRA-208ENST00000455631 CTGFP29279 349 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 PSMC4P43686 418 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 EXOSC9Q06265 439 aaKnown RBP29.34■■■□□ 2.29
PTPRA-208ENST00000455631 DCAF15Q66K64 600 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 C17orf99Q6UX52 265 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 FBXO33Q7Z6M2 555 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 FAM83AQ86UY5 434 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.34■■■□□ 2.29
PTPRA-208ENST00000455631 RAET1EQ8TD07 263 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 ZDHHC15Q96MV8 337 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 MROH5Q6ZUA9 1318 aa29.34■■■□□ 2.29
PTPRA-208ENST00000455631 CAVIN4Q5BKX8 364 aa29.33■■■□□ 2.29
PTPRA-208ENST00000455631 NKX2-3Q8TAU0 364 aa29.33■■■□□ 2.29
PTPRA-208ENST00000455631 TRIM47Q96LD4 638 aa29.33■■■□□ 2.29
PTPRA-208ENST00000455631 SZT2Q5T011 3432 aa29.33■■■□□ 2.29
PTPRA-208ENST00000455631 RPAP1Q9BWH6 1393 aaPredicted RBP29.32■■■□□ 2.28
PTPRA-208ENST00000455631 OSBPP22059 807 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 HOXD10P28358 340 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 GRK4P32298 578 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 PPATQ06203 517 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 CCDC184Q52MB2 194 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 SLC4A10Q6U841 1118 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 SUCLG2Q96I99 432 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 ZNF341Q9BYN7 854 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 RIPOR2Q9Y4F9 1068 aa29.32■■■□□ 2.28
PTPRA-208ENST00000455631 MYPNQ86TC9 1320 aa29.31■■■□□ 2.28
PTPRA-208ENST00000455631 ALDH1L1O75891 902 aa29.31■■■□□ 2.28
PTPRA-208ENST00000455631 FMNL1O95466 1100 aaPredicted RBP29.31■■■□□ 2.28
PTPRA-208ENST00000455631 MIGA2Q7L4E1 593 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms