RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ATG7O95352 703 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 PDGFAP04085 211 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 ESRRAP11474 423 aaPredicted RBP5.08□□□□□ -1.6
LINC02540-201ENST00000455554 ADH5P11766 374 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 EDN3P14138 238 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 GSTM4Q03013 218 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 MAP7Q14244 749 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 SPOCD1Q6ZMY3 1216 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 ASAP3Q8TDY4 903 aa5.08□□□□□ -1.6
LINC02540-201ENST00000455554 BHLHE41Q9C0J9 482 aaPredicted RBP5.08□□□□□ -1.6
LINC02540-201ENST00000455554 METTL12A8MUP2 240 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 EREGO14944 169 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 MZF1P28698 734 aaPredicted RBP5.07□□□□□ -1.6
LINC02540-201ENST00000455554 NOM1Q5C9Z4 860 aaKnown RBP5.07□□□□□ -1.6
LINC02540-201ENST00000455554 ZNF765Q7L2R6 523 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 SPRED2Q7Z698 418 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 NRSN2Q9GZP1 204 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 LATS2Q9NRM7 1088 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 SLC5A6Q9Y289 635 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 ACTL7BQ9Y614 415 aa5.07□□□□□ -1.6
LINC02540-201ENST00000455554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.06□□□□□ -1.6
LINC02540-201ENST00000455554 BIN1O00499 593 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 DYNC1LI2O43237 492 aaPredicted RBP5.06□□□□□ -1.6
LINC02540-201ENST00000455554 PHACTR2O75167 634 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 NFICP08651 508 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 RAB6AP20340 208 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 ATP2B4P23634 1241 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 SRPK2P78362 688 aaKnown RBP5.06□□□□□ -1.6
LINC02540-201ENST00000455554 PLCL1Q15111 1095 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 HELQQ8TDG4 1101 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 BCL7CQ8WUZ0 217 aaPredicted RBP5.06□□□□□ -1.6
LINC02540-201ENST00000455554 U3KQE9 123 aa5.06□□□□□ -1.6
LINC02540-201ENST00000455554 TNFRSF21O75509 655 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 ECEL1O95672 775 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 ZNF792Q3KQV3 632 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 HP1BP3Q5SSJ5 553 aaPredicted RBP5.05□□□□□ -1.6
LINC02540-201ENST00000455554 STK11IPQ8N1F8 1099 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 SNX29Q8TEQ0 813 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 SEMA6CQ9H3T2 930 aa5.05□□□□□ -1.6
LINC02540-201ENST00000455554 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.04□□□□□ -1.6
LINC02540-201ENST00000455554 DBX1A6NMT0 343 aa5.04□□□□□ -1.6
LINC02540-201ENST00000455554 EIF1AXP47813 144 aaKnown RBP5.04□□□□□ -1.6
LINC02540-201ENST00000455554 BNIP3Q12983 259 aa5.04□□□□□ -1.6
LINC02540-201ENST00000455554 PEAR1Q5VY43 1037 aaPredicted RBP5.04□□□□□ -1.6
LINC02540-201ENST00000455554 DYMQ7RTS9 669 aa5.04□□□□□ -1.6
LINC02540-201ENST00000455554 ACSS3Q9H6R3 686 aa5.04□□□□□ -1.6
LINC02540-201ENST00000455554 FARP2O94887 1054 aaPredicted RBP5.03□□□□□ -1.6
LINC02540-201ENST00000455554 CYP11A1P05108 521 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 MAOBP27338 520 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 CD96P40200 585 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 TMEM132AQ24JP5 1023 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 FBLN7Q53RD9 439 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 AKAP4Q5JQC9 854 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 SEZ6L2Q6UXD5 910 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 LGR6Q9HBX8 967 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 C1GALT1Q9NS00 363 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 FAM105AQ9NUU6 356 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 FOXD3Q9UJU5 478 aaPredicted RBP5.03□□□□□ -1.6
LINC02540-201ENST00000455554 ADAMTS6Q9UKP5 1117 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 POLIQ9UNA4 740 aa5.03□□□□□ -1.6
LINC02540-201ENST00000455554 MPSTP25325 297 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 PCDH1Q08174 1060 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 POU4F3Q15319 338 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 PKN1Q16512 942 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 ALKBH2Q6NS38 261 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 OGFOD3Q6PK18 319 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 ATG4DQ86TL0 474 aaPredicted RBP5.02□□□□□ -1.61
LINC02540-201ENST00000455554 MISP3Q96FF7 219 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 ZFYVE1Q9HBF4 777 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 RAD18Q9NS91 495 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 AP4E1Q9UPM8 1137 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 AMOTL2Q9Y2J4 779 aa5.02□□□□□ -1.61
LINC02540-201ENST00000455554 ASPAP45381 313 aa5.01□□□□□ -1.61
LINC02540-201ENST00000455554 EHHADHQ08426 723 aa5.01□□□□□ -1.61
LINC02540-201ENST00000455554 ZNF423Q2M1K9 1284 aa5.01□□□□□ -1.61
LINC02540-201ENST00000455554 FAM168AQ92567 244 aa5.01□□□□□ -1.61
LINC02540-201ENST00000455554 CLEC4MQ9H2X3 399 aaPredicted RBP5.01□□□□□ -1.61
LINC02540-201ENST00000455554 GSX1Q9H4S2 264 aaPredicted RBP5.01□□□□□ -1.61
LINC02540-201ENST00000455554 DAGLAQ9Y4D2 1042 aa5.01□□□□□ -1.61
LINC02540-201ENST00000455554 A0A096LPE4 126 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 A0A1W2PPZ6 126 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 USP5P45974 858 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 MTMR3Q13615 1198 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 CYP27C1Q4G0S4 372 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 CILP2Q8IUL8 1156 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 KSR1Q8IVT5 923 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 GLIS3Q8NEA6 775 aa5□□□□□ -1.61
LINC02540-201ENST00000455554 RC3H2Q9HBD1 1191 aaKnown RBP5□□□□□ -1.61
LINC02540-201ENST00000455554 POLR3DP05423 398 aaPredicted RBP4.99□□□□□ -1.61
LINC02540-201ENST00000455554 RNASE1P07998 156 aaKnown RBP4.99□□□□□ -1.61
LINC02540-201ENST00000455554 CD8BP10966 210 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 FUT4P22083 530 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 AAMPQ13685 434 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 SPRED3Q2MJR0 410 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 CCNJLQ8IV13 435 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 PLD6Q8N2A8 252 aaKnown RBP4.99□□□□□ -1.61
LINC02540-201ENST00000455554 FAM181AQ8N9Y4 354 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 NETO1Q8TDF5 533 aa4.99□□□□□ -1.61
LINC02540-201ENST00000455554 GTF3C2Q8WUA4 911 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms