RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 HSP90B1P14625 803 aaKnown RBP12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 TNFAIP1Q13829 316 aa12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 PDIA6Q15084 440 aa12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 ADAMTS19Q8TE59 1207 aa12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
NIPSNAP1-204ENST00000455496 NCOR1O75376 2440 aa12.46□□□□□ -0.42
NIPSNAP1-204ENST00000455496 EIF2S2P20042 333 aaKnown RBP12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 FLT3LGP49771 235 aa12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 IRF5Q13568 498 aa12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NIPSNAP1-204ENST00000455496 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 IRF6O14896 467 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ANP32CO43423 234 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ANXA1P04083 346 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 GTF2IP78347 998 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 CFAP100Q494V2 611 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 XAGE3Q8WTP9 111 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 TTYH1Q9H313 450 aaPredicted RBP12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 COL4A1P02462 1669 aa12.44□□□□□ -0.42
NIPSNAP1-204ENST00000455496 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PDHXO00330 501 aa12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PROSER3Q2NL68 480 aa12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 P2RX7Q99572 595 aaKnown RBP12.43□□□□□ -0.42
NIPSNAP1-204ENST00000455496 SMAD3P84022 425 aaKnown RBP12.42□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PPIL2Q13356 520 aa12.42□□□□□ -0.42
NIPSNAP1-204ENST00000455496 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
NIPSNAP1-204ENST00000455496 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
NIPSNAP1-204ENST00000455496 LRFN3Q9BTN0 628 aa12.42□□□□□ -0.42
NIPSNAP1-204ENST00000455496 CDH23Q9H251 3354 aa12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 MRPS5P82675 430 aaKnown RBP12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PARK7Q99497 189 aaKnown RBP12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PCDHAC2Q9Y5I4 1007 aa12.41□□□□□ -0.42
NIPSNAP1-204ENST00000455496 BCRP11274 1271 aa12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 THEGQ9P2T0 379 aa12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
NIPSNAP1-204ENST00000455496 PFASO15067 1338 aa12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 ATP5J2-PTCD1G3V325 749 aa12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TEPSINQ96N21 525 aa12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
NIPSNAP1-204ENST00000455496 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 F8W031 263 aaPredicted RBP12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TNNI2P48788 182 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 PPATQ06203 517 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TMEM31Q5JXX7 168 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 COA7Q96BR5 231 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 MUC6Q6W4X9 2439 aa12.38□□□□□ -0.43
NIPSNAP1-204ENST00000455496 BDP1A6H8Y1 2624 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 HMGCRP04035 888 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 U2AF1L5P0DN76 240 aaPredicted RBP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 MRE11P49959 708 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 U2AF1Q01081 240 aaKnown RBP eCLIP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 SHHQ15465 462 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 ZKSCAN4Q969J2 545 aaPredicted RBP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 WRNIP1Q96S55 665 aa12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 BSDC1Q9NW68 430 aaPredicted RBP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 ZNF70Q9UC06 446 aaPredicted RBP12.37□□□□□ -0.43
NIPSNAP1-204ENST00000455496 PDE8AO60658 829 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 CERS5Q8N5B7 392 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TMEM39BQ9GZU3 492 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 AOX1Q06278 1338 aa12.36□□□□□ -0.43
NIPSNAP1-204ENST00000455496 CYP2C8P10632 490 aa12.35□□□□□ -0.43
NIPSNAP1-204ENST00000455496 COL6A1P12109 1028 aa12.35□□□□□ -0.43
NIPSNAP1-204ENST00000455496 PPM1EQ8WY54 764 aa12.35□□□□□ -0.43
NIPSNAP1-204ENST00000455496 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
NIPSNAP1-204ENST00000455496 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
NIPSNAP1-204ENST00000455496 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms