RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
PTPA-225ENST00000455240 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
PTPA-225ENST00000455240 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
PTPA-225ENST00000455240 TEPSINQ96N21 525 aa20.33■□□□□ 0.85
PTPA-225ENST00000455240 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.85
PTPA-225ENST00000455240 E9PSI1 815 aa20.32■□□□□ 0.84
PTPA-225ENST00000455240 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
PTPA-225ENST00000455240 GRIK5Q16478 980 aa20.32■□□□□ 0.84
PTPA-225ENST00000455240 CAVIN4Q5BKX8 364 aa20.32■□□□□ 0.84
PTPA-225ENST00000455240 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
PTPA-225ENST00000455240 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
PTPA-225ENST00000455240 HTTP42858 3142 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 FRAT2O75474 233 aaPredicted RBP20.31■□□□□ 0.84
PTPA-225ENST00000455240 PDE8BO95263 885 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 TNNI2P48788 182 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 HDLBPQ00341 1268 aaKnown RBP20.31■□□□□ 0.84
PTPA-225ENST00000455240 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 ELP3Q9H9T3 547 aa20.31■□□□□ 0.84
PTPA-225ENST00000455240 TESPA1A2RU30 521 aaPredicted RBP20.3■□□□□ 0.84
PTPA-225ENST00000455240 CRHR2Q13324 411 aa20.3■□□□□ 0.84
PTPA-225ENST00000455240 OTOP1Q7RTM1 612 aa20.3■□□□□ 0.84
PTPA-225ENST00000455240 OPTNQ96CV9 577 aa20.3■□□□□ 0.84
PTPA-225ENST00000455240 TRIM17Q9Y577 477 aa20.3■□□□□ 0.84
PTPA-225ENST00000455240 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
PTPA-225ENST00000455240 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 TEKT1Q969V4 418 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 USP44Q9H0E7 712 aa20.29■□□□□ 0.84
PTPA-225ENST00000455240 BCAMP50895 628 aa20.28■□□□□ 0.84
PTPA-225ENST00000455240 PUM3Q15397 648 aaKnown RBP20.28■□□□□ 0.84
PTPA-225ENST00000455240 PTPN18Q99952 460 aa20.28■□□□□ 0.84
PTPA-225ENST00000455240 MAST3O60307 1309 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 IFIT1P09914 478 aaKnown RBP20.27■□□□□ 0.84
PTPA-225ENST00000455240 MAP3K9P80192 1104 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 VGLL4Q14135 290 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 PRPF38BQ5VTL8 546 aaKnown RBP20.27■□□□□ 0.84
PTPA-225ENST00000455240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTPA-225ENST00000455240 MS4A4AQ96JQ5 239 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 ZDHHC15Q96MV8 337 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
PTPA-225ENST00000455240 FGFR2P21802 821 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 CACNB3P54284 484 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 SLFN5Q08AF3 891 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 CD99L2Q8TCZ2 262 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 MRIQ9BWK5 157 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 TMOD2Q9NZR1 351 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 CSADQ9Y600 493 aa20.26■□□□□ 0.83
PTPA-225ENST00000455240 KIAA0100Q14667 2235 aaKnown RBP20.26■□□□□ 0.83
PTPA-225ENST00000455240 ALDH1L2Q3SY69 923 aa20.25■□□□□ 0.83
PTPA-225ENST00000455240 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
PTPA-225ENST00000455240 CCL15-CCL14A0A0B4J2E2 113 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 EYA2O00167 538 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
PTPA-225ENST00000455240 GTF2A2P52657 109 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 SP3Q02447 781 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 CCL15Q16663 113 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 FKBP1CQ5VVH2 108 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 APOBEC3HQ6NTF7 200 aaKnown RBP20.24■□□□□ 0.83
PTPA-225ENST00000455240 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
PTPA-225ENST00000455240 RBBP6Q7Z6E9 1792 aaKnown RBP20.23■□□□□ 0.83
PTPA-225ENST00000455240 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
PTPA-225ENST00000455240 SLC5A1P13866 664 aa20.23■□□□□ 0.83
PTPA-225ENST00000455240 INTS3Q68E01 1043 aaKnown RBP20.23■□□□□ 0.83
PTPA-225ENST00000455240 OTUD5Q96G74 571 aa20.23■□□□□ 0.83
PTPA-225ENST00000455240 EFCC1Q9HA90 598 aa20.23■□□□□ 0.83
PTPA-225ENST00000455240 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
PTPA-225ENST00000455240 PTPN22Q9Y2R2 807 aa20.23■□□□□ 0.83
PTPA-225ENST00000455240 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
PTPA-225ENST00000455240 HHIPL2Q6UWX4 724 aa20.22■□□□□ 0.83
PTPA-225ENST00000455240 LPIN2Q92539 896 aa20.22■□□□□ 0.83
PTPA-225ENST00000455240 HOOK2Q96ED9 719 aa20.22■□□□□ 0.83
PTPA-225ENST00000455240 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
PTPA-225ENST00000455240 TAF1CQ15572 869 aaPredicted RBP20.21■□□□□ 0.83
PTPA-225ENST00000455240 ATG9AQ7Z3C6 839 aa20.21■□□□□ 0.83
PTPA-225ENST00000455240 WDR66Q8TBY9 1149 aa20.21■□□□□ 0.83
PTPA-225ENST00000455240 WRNIP1Q96S55 665 aa20.21■□□□□ 0.83
PTPA-225ENST00000455240 ZFYVE28Q9HCC9 887 aa20.21■□□□□ 0.83
PTPA-225ENST00000455240 UBTFL1P0CB47 393 aaPredicted RBP20.2■□□□□ 0.82
PTPA-225ENST00000455240 ERO1BQ86YB8 467 aa20.2■□□□□ 0.82
PTPA-225ENST00000455240 ARMC5Q96C12 935 aa20.2■□□□□ 0.82
PTPA-225ENST00000455240 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
PTPA-225ENST00000455240 CAP1Q01518 475 aa20.19■□□□□ 0.82
PTPA-225ENST00000455240 DCAF15Q66K64 600 aa20.19■□□□□ 0.82
PTPA-225ENST00000455240 FAM43AQ8N2R8 423 aa20.19■□□□□ 0.82
PTPA-225ENST00000455240 FBXO3Q9UK99 471 aa20.19■□□□□ 0.82
PTPA-225ENST00000455240 CENPFP49454 3210 aa20.18■□□□□ 0.82
PTPA-225ENST00000455240 POTEFA5A3E0 1075 aa20.18■□□□□ 0.82
PTPA-225ENST00000455240 CIAO1O76071 339 aa20.18■□□□□ 0.82
PTPA-225ENST00000455240 CETPP11597 493 aa20.18■□□□□ 0.82
PTPA-225ENST00000455240 ZKSCAN4Q969J2 545 aaPredicted RBP20.18■□□□□ 0.82
PTPA-225ENST00000455240 WDHD1O75717 1129 aaPredicted RBP20.17■□□□□ 0.82
PTPA-225ENST00000455240 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
PTPA-225ENST00000455240 PPIL2Q13356 520 aa20.17■□□□□ 0.82
PTPA-225ENST00000455240 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
PTPA-225ENST00000455240 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms