RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.62□□□□□ -0.39
CLCN4-204ENST00000454850 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 DNAAF4Q8WXU2 420 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 TMEM39BQ9GZU3 492 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 TTF2Q9UNY4 1162 aaKnown RBP12.62□□□□□ -0.39
CLCN4-204ENST00000454850 CSADQ9Y600 493 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 MGAMO43451 1857 aa12.61□□□□□ -0.39
CLCN4-204ENST00000454850 COL6A3P12111 3177 aa12.61□□□□□ -0.39
CLCN4-204ENST00000454850 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
CLCN4-204ENST00000454850 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
CLCN4-204ENST00000454850 ZNF594Q96JF6 807 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-204ENST00000454850 WDHD1O75717 1129 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-204ENST00000454850 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 FOXO4P98177 505 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 KIF22Q14807 665 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CLCN4-204ENST00000454850 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
CLCN4-204ENST00000454850 GYG1P46976 350 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 TNNI2P48788 182 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 CACNB3P54284 484 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 LACTBP83111 547 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-204ENST00000454850 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCN4-204ENST00000454850 DPF3Q92784 378 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 FAM205AQ6ZU69 1335 aa12.59□□□□□ -0.39
CLCN4-204ENST00000454850 BTBD19C9JJ37 291 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 TLR2O60603 784 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 CETPP11597 493 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 CRKP46108 304 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 CCDC57Q2TAC2 916 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-204ENST00000454850 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-204ENST00000454850 SNCAIPQ9Y6H5 919 aa12.58□□□□□ -0.4
CLCN4-204ENST00000454850 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 F6X3S4 739 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 HIBADHP31937 336 aaKnown RBP12.57□□□□□ -0.4
CLCN4-204ENST00000454850 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-204ENST00000454850 MTFR1Q15390 333 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 TDRD7Q8NHU6 1098 aaKnown RBP12.57□□□□□ -0.4
CLCN4-204ENST00000454850 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 PRKRIP1Q9H875 184 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-204ENST00000454850 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
CLCN4-204ENST00000454850 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
CLCN4-204ENST00000454850 IRF6O14896 467 aa12.56□□□□□ -0.4
CLCN4-204ENST00000454850 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
CLCN4-204ENST00000454850 GRIK5Q16478 980 aa12.56□□□□□ -0.4
CLCN4-204ENST00000454850 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
CLCN4-204ENST00000454850 CTGFP29279 349 aa12.55□□□□□ -0.4
CLCN4-204ENST00000454850 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
CLCN4-204ENST00000454850 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
CLCN4-204ENST00000454850 FAM84BQ96KN1 310 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-204ENST00000454850 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
CLCN4-204ENST00000454850 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-204ENST00000454850 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-204ENST00000454850 GNRH1P01148 92 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 PSMC4P43686 418 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 PPIL2Q13356 520 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 UBE4AQ14139 1066 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 VPS37DQ86XT2 251 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 PUS3Q9BZE2 481 aaKnown RBP12.54□□□□□ -0.4
CLCN4-204ENST00000454850 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-204ENST00000454850 FANCIQ9NVI1 1328 aa12.54□□□□□ -0.4
CLCN4-204ENST00000454850 GRM8O00222 908 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 OSBPP22059 807 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 GRK4P32298 578 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 PRMT2P55345 433 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-204ENST00000454850 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
CLCN4-204ENST00000454850 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-204ENST00000454850 SRRDQ9UH36 339 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
CLCN4-204ENST00000454850 PTPRFP10586 1907 aa12.52□□□□□ -0.4
CLCN4-204ENST00000454850 CCL5P13501 91 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 INPP5BP32019 993 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 C17orf99Q6UX52 265 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 RNF208Q9H0X6 261 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 MYPNQ86TC9 1320 aa12.52□□□□□ -0.41
CLCN4-204ENST00000454850 PDHXO00330 501 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 HOXD10P28358 340 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 CCDC27Q2M243 656 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms