RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 PARP10Q53GL7 1025 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 FAM173BQ6P4H8 233 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 TTC6Q86TZ1 520 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 IQUBQ8NA54 791 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 ITSN2Q9NZM3 1697 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 NPC1L1Q9UHC9 1359 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 KDM5DQ9BY66 1539 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 PRDM1O75626 825 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 TEX11Q8IYF3 940 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 EYA3Q99504 573 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 DENND2AQ9ULE3 1009 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
HCG18-239ENST00000454129 ZCCHC11Q5TAX3 1644 aaKnown RBP7.48□□□□□ -1.21
HCG18-239ENST00000454129 POTEB2H3BUK9 544 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 DTNBO60941 627 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 PHACTR2O75167 634 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 HIBADHP31937 336 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 DDIT3P35638 169 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 GCKRQ14397 625 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 TBC1D5Q92609 795 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 APPBP2Q92624 585 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 SUCLG2Q96I99 432 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 PRIMPOLQ96LW4 560 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 SLC52A2Q9HAB3 445 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 SHROOM2Q13796 1616 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 SGSM2O43147 1006 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 PDE8AO60658 829 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 PUM3Q15397 648 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 KIAA0753Q2KHM9 967 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 CCDC91Q7Z6B0 441 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 USP37Q86T82 979 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 DDX17Q92841 729 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 MPHOSPH6Q99547 160 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 CCNL1Q9UK58 526 aaPredicted RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 ZHX1Q9UKY1 873 aaPredicted RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 EDC4Q6P2E9 1401 aaKnown RBP7.47□□□□□ -1.21
HCG18-239ENST00000454129 GPAA1O43292 621 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 TAF5LO75529 589 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 HS2ST1Q7LGA3 356 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 CCDC24Q8N4L8 307 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 ARMT1Q9H993 441 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 IFNKQ9P0W0 207 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 ZKSCAN5Q9Y2L8 839 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 TTC37Q6PGP7 1564 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 SLC27A2O14975 620 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 ACTN2P35609 894 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 PLS1Q14651 629 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 ZNF174Q15697 407 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 CTR9Q6PD62 1173 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 MAATS1Q7Z4T9 603 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 KBTBD3Q8NAB2 608 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 CCDC42Q96M95 316 aa7.47□□□□□ -1.21
HCG18-239ENST00000454129 COL17A1Q9UMD9 1497 aaPredicted RBP7.46□□□□□ -1.21
HCG18-239ENST00000454129 GOLGA6L10A0A0M3HER8 536 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 GCOM1H8Y6P7 765 aaPredicted RBP7.46□□□□□ -1.21
HCG18-239ENST00000454129 UFL1O94874 794 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 MYZAPP0CAP1 466 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 UBE4AQ14139 1066 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 BMS1Q14692 1282 aaKnown RBP7.46□□□□□ -1.21
HCG18-239ENST00000454129 LETM2Q2VYF4 491 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 GAS2L3Q86XJ1 694 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 SAP30BPQ9UHR5 308 aaKnown RBP7.46□□□□□ -1.21
HCG18-239ENST00000454129 SNX14Q9Y5W7 946 aa7.46□□□□□ -1.21
HCG18-239ENST00000454129 NCOA3Q9Y6Q9 1424 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 PLEKHG3A1L390 1219 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 SPDYE4A6NLX3 237 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 DYNC1I1O14576 645 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 OTUD7BQ6GQQ9 843 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 CDCA7Q9BWT1 371 aaPredicted RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 PLVAPQ9BX97 442 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 ANGEL1Q9UNK9 670 aaKnown RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 CLEC11AQ9Y240 323 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 V9GY48 417 aaPredicted RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 LMTK3Q96Q04 1460 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 CTAGE15A4D2H0 777 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 CTAGE8P0CG41 777 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 KIF5AQ12840 1032 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 CTAGE6Q86UF2 777 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 CTAGE4Q8IX94 777 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 SMAP1Q8IYB5 467 aaPredicted RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 CCDC97Q96F63 343 aaPredicted RBP7.46□□□□□ -1.22
HCG18-239ENST00000454129 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 SYNCQ9H7C4 482 aa7.46□□□□□ -1.22
HCG18-239ENST00000454129 PARP1P09874 1014 aaKnown RBP7.45□□□□□ -1.22
HCG18-239ENST00000454129 CCDC175P0C221 793 aa7.45□□□□□ -1.22
HCG18-239ENST00000454129 MRPL12P52815 198 aaKnown RBP7.45□□□□□ -1.22
HCG18-239ENST00000454129 RILPL1Q5EBL4 403 aa7.45□□□□□ -1.22
HCG18-239ENST00000454129 TMEM87AQ8NBN3 555 aa7.45□□□□□ -1.22
HCG18-239ENST00000454129 SHANK2Q9UPX8 1470 aa7.45□□□□□ -1.22
HCG18-239ENST00000454129 EIF2AK4Q9P2K8 1649 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms