RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CELA3AP09093 270 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 FGRP09769 529 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 GARTP22102 1010 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 EIF4A3P38919 411 aaKnown RBP5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 LIG3P49916 1009 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 RBL2Q08999 1139 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 RSPO4Q2I0M5 234 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 HFE2Q6ZVN8 426 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 Q8N3U1 123 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 BSNDQ8WZ55 320 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 GPRASP2Q96D09 838 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 SPATA32Q96LK8 384 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 SPON2Q9BUD6 331 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 UBE2OQ9C0C9 1292 aaKnown RBP5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 MUC3BQ9H195 1237 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 RBSNQ9H1K0 784 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 TPSG1Q9NRR2 321 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 SOX13Q9UN79 622 aa5.82□□□□□ -1.48
HMGB1P15-201ENST00000453854 GREM1O60565 184 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 SMNDC1O75940 238 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 DNAJA1P31689 397 aaKnown RBP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 GBP2P32456 591 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 RPS26P62854 115 aaKnown RBP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 PRRT3Q5FWE3 981 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 NKAPLQ5M9Q1 402 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 ADAMTSL4Q6UY14 1074 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 TPTE2Q6XPS3 522 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 AGMOQ6ZNB7 445 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 FAM35AQ86V20 835 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 VPS37DQ86XT2 251 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 MCF2L2Q86YR7 1114 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 KIAA0825Q8IV33 1275 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 NUDT8Q8WV74 236 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 TTC9Q92623 222 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 PLD4Q96BZ4 506 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 SEC16BQ96JE7 1060 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 ADAM19Q9H013 955 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 CLEC4MQ9H2X3 399 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 FRRS1LQ9P0K9 344 aa5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 PPP1R1BQ9UD71 204 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P15-201ENST00000453854 SPDYE3A6NKU9 549 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 MINDY4BA8MYZ0 360 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 LILRB5O75023 590 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 PAGE1O75459 146 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 EIF2AK2P19525 551 aaKnown RBP5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 LMNB2Q03252 620 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 TRIM28Q13263 835 aaKnown RBP5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 PERM1Q5SV97 790 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 FBXL19Q6PCT2 694 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 ILDR2Q71H61 639 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 VN1R5Q7Z5H4 357 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 ASAP3Q8TDY4 903 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 ZNF296Q8WUU4 475 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 EAF1Q96JC9 268 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 LPIN3Q9BQK8 851 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 NT5C1AQ9BXI3 368 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 JPH1Q9HDC5 661 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 TMEM39AQ9NV64 488 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
HMGB1P15-201ENST00000453854 A0A0A0MRY4 1105 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 B3GALT4O96024 378 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 PF4P02776 101 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 CPB1P15086 417 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 SELPP16109 830 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 AFF1P51825 1210 aaKnown RBP5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 ZNF423Q2M1K9 1284 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 FOXD4L6Q3SYB3 417 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 TRAPPC3LQ5T215 181 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 CEP135Q66GS9 1140 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 TTBK2Q6IQ55 1244 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 SHISA2Q6UWI4 295 aa5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 FOXD4L3Q6VB84 417 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 DHX38Q92620 1227 aaKnown RBP5.79□□□□□ -1.48
HMGB1P15-201ENST00000453854 TTBK1Q5TCY1 1321 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 F6X3S4 739 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 APBA3O96018 575 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 PTPRAP18433 802 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 BMP6P22004 513 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 PCDH1Q08174 1060 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 CAMK2GQ13555 558 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 COL9A2Q14055 689 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 MAP3K11Q16584 847 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 PCNX4Q63HM2 1172 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 PSAPL1Q6NUJ1 521 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 ELMSAN1Q6PJG2 1045 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 CCDC84Q86UT8 332 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 CACTIN-AS1Q8N1I8 211 aa5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 SMG9Q9H0W8 520 aaKnown RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 SUPT16HQ9Y5B9 1047 aaKnown RBP5.78□□□□□ -1.48
HMGB1P15-201ENST00000453854 ESRRAP11474 423 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 SOX9P48436 509 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 PPP2R3AQ06190 1150 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 GRIK5Q16478 980 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 DPH6Q7L8W6 267 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 LRRC3Q9BY71 257 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms