RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
SNX17-204ENST00000453453 ANP32BQ92688 251 aaKnown RBP18.91■□□□□ 0.62
SNX17-204ENST00000453453 KIF2CQ99661 725 aa18.91■□□□□ 0.62
SNX17-204ENST00000453453 ABCF2Q9UG63 623 aa18.91■□□□□ 0.62
SNX17-204ENST00000453453 MAST2Q6P0Q8 1798 aa18.9■□□□□ 0.62
SNX17-204ENST00000453453 A0A0D9SFI3 127 aa18.9■□□□□ 0.62
SNX17-204ENST00000453453 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
SNX17-204ENST00000453453 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
SNX17-204ENST00000453453 ZMYM1Q5SVZ6 1142 aa18.9■□□□□ 0.62
SNX17-204ENST00000453453 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
SNX17-204ENST00000453453 IGSF3O75054 1194 aa18.89■□□□□ 0.62
SNX17-204ENST00000453453 MCCP23508 829 aa18.89■□□□□ 0.62
SNX17-204ENST00000453453 UBE3CQ15386 1083 aa18.89■□□□□ 0.62
SNX17-204ENST00000453453 PSMD1Q99460 953 aa18.89■□□□□ 0.62
SNX17-204ENST00000453453 RAI14Q9P0K7 980 aa18.89■□□□□ 0.62
SNX17-204ENST00000453453 SNED1Q8TER0 1413 aa18.89■□□□□ 0.61
SNX17-204ENST00000453453 PDE6AP16499 860 aa18.89■□□□□ 0.61
SNX17-204ENST00000453453 ADD2P35612 726 aa18.89■□□□□ 0.61
SNX17-204ENST00000453453 ZNF445P59923 1031 aa18.89■□□□□ 0.61
SNX17-204ENST00000453453 APPBP2Q92624 585 aa18.89■□□□□ 0.61
SNX17-204ENST00000453453 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 SALL1Q9NSC2 1324 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 NUCB2P80303 420 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 RABEP1Q15276 862 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
SNX17-204ENST00000453453 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 TBC1D22AQ8WUA7 517 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 USP26Q9BXU7 913 aa18.88■□□□□ 0.61
SNX17-204ENST00000453453 MAGEB6Q8N7X4 407 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 WWC3Q9ULE0 1092 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 BCS1LQ9Y276 419 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 CCDC171Q6TFL3 1326 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
SNX17-204ENST00000453453 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 DOK7Q18PE1 504 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.86■□□□□ 0.61
SNX17-204ENST00000453453 PODNQ7Z5L7 613 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 GAS2L3Q86XJ1 694 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
SNX17-204ENST00000453453 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 IL25Q9H293 177 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 MAST3O60307 1309 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 FAM205AQ6ZU69 1335 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 CHD4Q14839 1912 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 LDHBP07195 334 aaKnown RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 AOC3Q16853 763 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 NAA16Q6N069 864 aaPredicted RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 DZIP1Q86YF9 867 aaKnown RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 FBXW7Q969H0 707 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 LSG1Q9H089 658 aaKnown RBP18.85■□□□□ 0.61
SNX17-204ENST00000453453 JAG2Q9Y219 1238 aa18.85■□□□□ 0.61
SNX17-204ENST00000453453 ECE2O60344 883 aa18.84■□□□□ 0.61
SNX17-204ENST00000453453 OFD1O75665 1012 aa18.84■□□□□ 0.61
SNX17-204ENST00000453453 CHGBP05060 677 aa18.84■□□□□ 0.61
SNX17-204ENST00000453453 OSBP2Q969R2 916 aa18.84■□□□□ 0.61
SNX17-204ENST00000453453 FHDC1Q9C0D6 1143 aaPredicted RBP18.84■□□□□ 0.61
SNX17-204ENST00000453453 DBNDD1Q9H9R9 158 aa18.84■□□□□ 0.61
SNX17-204ENST00000453453 TCRBV5S4A2TA0A5A2 114 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 M0R2C6 588 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 CYP7A1P22680 504 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 GTF2IP78347 998 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 GSTO1P78417 241 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 MFSD14BQ5SR56 506 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.61
SNX17-204ENST00000453453 AIDAQ96BJ3 306 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 MAP7D2Q96T17 732 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 PDCL3Q9H2J4 239 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 TAOK3Q9H2K8 898 aa18.83■□□□□ 0.61
SNX17-204ENST00000453453 CWC22Q9HCG8 908 aaKnown RBP18.83■□□□□ 0.61
SNX17-204ENST00000453453 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
SNX17-204ENST00000453453 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 CCDC129Q6ZRS4 1044 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 LARGE2Q8N3Y3 721 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 PRDX5P30044 214 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 MECOMQ03112 1051 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 TTLL5Q6EMB2 1281 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 NSUN4Q96CB9 384 aaKnown RBP18.82■□□□□ 0.6
SNX17-204ENST00000453453 PUS7LQ9H0K6 701 aaKnown RBP18.82■□□□□ 0.6
SNX17-204ENST00000453453 ZNF277Q9NRM2 450 aaPredicted RBP18.82■□□□□ 0.6
SNX17-204ENST00000453453 SUGT1Q9Y2Z0 365 aa18.82■□□□□ 0.6
SNX17-204ENST00000453453 GPAA1O43292 621 aa18.81■□□□□ 0.6
SNX17-204ENST00000453453 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
SNX17-204ENST00000453453 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
SNX17-204ENST00000453453 PSME4Q14997 1843 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 LDHCP07864 332 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 MCM5P33992 734 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 PTH1RQ03431 593 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
SNX17-204ENST00000453453 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
SNX17-204ENST00000453453 LTBP3Q9NS15 1303 aa18.79■□□□□ 0.6
SNX17-204ENST00000453453 MYH2Q9UKX2 1941 aa18.79■□□□□ 0.6
SNX17-204ENST00000453453 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
SNX17-204ENST00000453453 MBD4O95243 580 aa18.79■□□□□ 0.6
SNX17-204ENST00000453453 STRIP1Q5VSL9 837 aa18.79■□□□□ 0.6
SNX17-204ENST00000453453 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms