RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
PTPA-224ENST00000453358 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
PTPA-224ENST00000453358 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
PTPA-224ENST00000453358 HIBADHP31937 336 aaKnown RBP16.39■□□□□ 0.21
PTPA-224ENST00000453358 VGLL4Q14135 290 aa16.39■□□□□ 0.21
PTPA-224ENST00000453358 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
PTPA-224ENST00000453358 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
PTPA-224ENST00000453358 CCL15-CCL14A0A0B4J2E2 113 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 CRKP46108 304 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 GTF2A2P52657 109 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 MAP3K9P80192 1104 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
PTPA-224ENST00000453358 CCL15Q16663 113 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 WDR63Q8IWG1 891 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPA-224ENST00000453358 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
PTPA-224ENST00000453358 CEP290O15078 2479 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 GRIK5Q16478 980 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
PTPA-224ENST00000453358 ZFYVE28Q9HCC9 887 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 C9orf78Q9NZ63 289 aaPredicted RBP16.37■□□□□ 0.21
PTPA-224ENST00000453358 PTCH2Q9Y6C5 1203 aa16.37■□□□□ 0.21
PTPA-224ENST00000453358 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
PTPA-224ENST00000453358 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 TNNI2P48788 182 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 CSADQ9Y600 493 aa16.36■□□□□ 0.21
PTPA-224ENST00000453358 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
PTPA-224ENST00000453358 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
PTPA-224ENST00000453358 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
PTPA-224ENST00000453358 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
PTPA-224ENST00000453358 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
PTPA-224ENST00000453358 SZT2Q5T011 3432 aa16.35■□□□□ 0.21
PTPA-224ENST00000453358 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPA-224ENST00000453358 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
PTPA-224ENST00000453358 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
PTPA-224ENST00000453358 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
PTPA-224ENST00000453358 SNCAIPQ9Y6H5 919 aa16.34■□□□□ 0.21
PTPA-224ENST00000453358 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
PTPA-224ENST00000453358 CACNB3P54284 484 aa16.33■□□□□ 0.2
PTPA-224ENST00000453358 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
PTPA-224ENST00000453358 SLC4A10Q6U841 1118 aa16.33■□□□□ 0.2
PTPA-224ENST00000453358 SRCIN1Q9C0H9 1055 aa16.33■□□□□ 0.2
PTPA-224ENST00000453358 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
PTPA-224ENST00000453358 TLR2O60603 784 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 CETPP11597 493 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 TBC1D22AQ8WUA7 517 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 TEKT1Q969V4 418 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 WRNIP1Q96S55 665 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 ARHGAP39Q9C0H5 1083 aa16.32■□□□□ 0.2
PTPA-224ENST00000453358 UTYO14607 1347 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 BTBD19C9JJ37 291 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
PTPA-224ENST00000453358 LACTBP83111 547 aaPredicted RBP16.31■□□□□ 0.2
PTPA-224ENST00000453358 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 FAM83AQ86UY5 434 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 SH3TC2Q8TF17 1288 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 ZDHHC15Q96MV8 337 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 TRIOBPQ9H2D6 2365 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
PTPA-224ENST00000453358 IRF6O14896 467 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 PPIL2Q13356 520 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 RABL6Q3YEC7 729 aaPredicted RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 FKBP1CQ5VVH2 108 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 APOBEC3HQ6NTF7 200 aaKnown RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 MRS2Q9HD23 443 aa16.3■□□□□ 0.2
PTPA-224ENST00000453358 COLQQ9Y215 455 aaPredicted RBP16.3■□□□□ 0.2
PTPA-224ENST00000453358 FRAT2O75474 233 aaPredicted RBP16.29■□□□□ 0.2
PTPA-224ENST00000453358 BCAMP50895 628 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 KIF22Q14807 665 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
PTPA-224ENST00000453358 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
PTPA-224ENST00000453358 PDE8BO95263 885 aa16.28■□□□□ 0.2
PTPA-224ENST00000453358 GNRH1P01148 92 aa16.28■□□□□ 0.2
PTPA-224ENST00000453358 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
PTPA-224ENST00000453358 SUGT1Q9Y2Z0 365 aa16.28■□□□□ 0.2
PTPA-224ENST00000453358 H0YGN5 161 aa16.27■□□□□ 0.2
PTPA-224ENST00000453358 PRMT2P55345 433 aa16.27■□□□□ 0.2
PTPA-224ENST00000453358 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
PTPA-224ENST00000453358 C17orf99Q6UX52 265 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms