RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SERPINA10Q9UK55 444 aa27.72■■■□□ 2.03
TNFRSF25-208ENST00000453341 ARHGEF6Q15052 776 aa27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 MFSD14BQ5SR56 506 aa27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 SH3TC2Q8TF17 1288 aa27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 OTUD5Q96G74 571 aa27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 ZNF594Q96JF6 807 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 TTF2Q9UNY4 1162 aaKnown RBP27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 CHMP3Q9Y3E7 222 aa27.71■■■□□ 2.03
TNFRSF25-208ENST00000453341 TCP10L2B9ZVM9 353 aa27.7■■■□□ 2.02
TNFRSF25-208ENST00000453341 PLIN1O60240 522 aa27.7■■■□□ 2.02
TNFRSF25-208ENST00000453341 MAP3K9P80192 1104 aa27.7■■■□□ 2.02
TNFRSF25-208ENST00000453341 DZIP1LQ8IYY4 767 aaKnown RBP27.7■■■□□ 2.02
TNFRSF25-208ENST00000453341 EPHA10Q5JZY3 1008 aa27.69■■■□□ 2.02
TNFRSF25-208ENST00000453341 TDRD7Q8NHU6 1098 aaKnown RBP27.69■■■□□ 2.02
TNFRSF25-208ENST00000453341 CACNA1FO60840 1977 aa27.68■■■□□ 2.02
TNFRSF25-208ENST00000453341 LMBR1LQ6UX01 489 aa27.67■■■□□ 2.02
TNFRSF25-208ENST00000453341 TLR2O60603 784 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 CRKP46108 304 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 GYG1P46976 350 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 GRIK5Q16478 980 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 LDHAL6AQ6ZMR3 332 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 CSADQ9Y600 493 aa27.66■■■□□ 2.02
TNFRSF25-208ENST00000453341 SPDYE5A6NIY4 337 aa27.65■■■□□ 2.02
TNFRSF25-208ENST00000453341 LACTBP83111 547 aaPredicted RBP27.65■■■□□ 2.02
TNFRSF25-208ENST00000453341 SNCAIPQ9Y6H5 919 aa27.65■■■□□ 2.02
TNFRSF25-208ENST00000453341 BTBD19C9JJ37 291 aa27.64■■■□□ 2.02
TNFRSF25-208ENST00000453341 BEND3Q5T5X7 828 aa27.64■■■□□ 2.02
TNFRSF25-208ENST00000453341 WWC1Q8IX03 1113 aa27.64■■■□□ 2.02
TNFRSF25-208ENST00000453341 SHISA4Q96DD7 197 aa27.64■■■□□ 2.02
TNFRSF25-208ENST00000453341 CNNM1Q9NRU3 951 aa27.64■■■□□ 2.02
TNFRSF25-208ENST00000453341 F6X3S4 739 aa27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 TNNI2P48788 182 aa27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 CCDC27Q2M243 656 aa27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 CCDC57Q2TAC2 916 aa27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 CHRDL2Q6WN34 429 aa27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 FAM84BQ96KN1 310 aaPredicted RBP27.63■■■□□ 2.01
TNFRSF25-208ENST00000453341 HIBADHP31937 336 aaKnown RBP27.62■■■□□ 2.01
TNFRSF25-208ENST00000453341 CACNB3P54284 484 aa27.62■■■□□ 2.01
TNFRSF25-208ENST00000453341 TAF7LQ5H9L4 462 aa27.62■■■□□ 2.01
TNFRSF25-208ENST00000453341 CETPP11597 493 aa27.61■■■□□ 2.01
TNFRSF25-208ENST00000453341 UBE4AQ14139 1066 aa27.61■■■□□ 2.01
TNFRSF25-208ENST00000453341 KIF22Q14807 665 aa27.61■■■□□ 2.01
TNFRSF25-208ENST00000453341 MTFR1Q15390 333 aa27.61■■■□□ 2.01
TNFRSF25-208ENST00000453341 IRF6O14896 467 aa27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 ECM2O94769 699 aaPredicted RBP27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 CTGFP29279 349 aa27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 ERO1BQ86YB8 467 aa27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 ZKSCAN4Q969J2 545 aaPredicted RBP27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 PUS3Q9BZE2 481 aaKnown RBP27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 ZCCHC17Q9NP64 241 aaKnown RBP27.6■■■□□ 2.01
TNFRSF25-208ENST00000453341 RBM27Q9P2N5 1060 aaKnown RBP27.59■■■□□ 2.01
TNFRSF25-208ENST00000453341 VAMP4O75379 141 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 WDHD1O75717 1129 aaPredicted RBP27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 GNRH1P01148 92 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 WRNIP1Q96S55 665 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 IL16Q14005 1332 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 FANCIQ9NVI1 1328 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 A0A0C4DFX4 3053 aa27.58■■■□□ 2.01
TNFRSF25-208ENST00000453341 GRM8O00222 908 aa27.57■■■□□ 2
TNFRSF25-208ENST00000453341 PRMT2P55345 433 aa27.57■■■□□ 2
TNFRSF25-208ENST00000453341 SNAPC2Q13487 334 aa27.57■■■□□ 2
TNFRSF25-208ENST00000453341 C17orf99Q6UX52 265 aa27.57■■■□□ 2
TNFRSF25-208ENST00000453341 IQSEC3Q9UPP2 1182 aaPredicted RBP27.57■■■□□ 2
TNFRSF25-208ENST00000453341 COL6A3P12111 3177 aa27.55■■■□□ 2
TNFRSF25-208ENST00000453341 PPIL2Q13356 520 aa27.55■■■□□ 2
TNFRSF25-208ENST00000453341 DPF3Q92784 378 aa27.55■■■□□ 2
TNFRSF25-208ENST00000453341 CPA4Q9UI42 421 aa27.55■■■□□ 2
TNFRSF25-208ENST00000453341 HDLBPQ00341 1268 aaKnown RBP27.54■■■□□ 2
TNFRSF25-208ENST00000453341 CHAF1AQ13111 956 aaPredicted RBP27.54■■■□□ 2
TNFRSF25-208ENST00000453341 LAMA3Q16787 3333 aa27.54■■■□□ 2
TNFRSF25-208ENST00000453341 FBXO33Q7Z6M2 555 aa27.54■■■□□ 2
TNFRSF25-208ENST00000453341 UBE2Q1Q7Z7E8 422 aa27.54■■■□□ 2
TNFRSF25-208ENST00000453341 TRIM47Q96LD4 638 aa27.54■■■□□ 2
TNFRSF25-208ENST00000453341 SRRDQ9UH36 339 aa27.54■■■□□ 2
TNFRSF25-208ENST00000453341 CCDC184Q52MB2 194 aa27.53■■■□□ 2
TNFRSF25-208ENST00000453341 ADGRA2Q96PE1 1338 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 OSBPP22059 807 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 PSMC4P43686 418 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 FAM83AQ86UY5 434 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 TEKT1Q969V4 418 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 PRO3102Q9H379 93 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 RIPOR2Q9Y4F9 1068 aa27.52■■■□□ 2
TNFRSF25-208ENST00000453341 APOBEC3HQ6NTF7 200 aaKnown RBP27.51■■□□□ 1.99
TNFRSF25-208ENST00000453341 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.51■■□□□ 1.99
TNFRSF25-208ENST00000453341 KAZALD1Q96I82 304 aa27.51■■□□□ 1.99
TNFRSF25-208ENST00000453341 ZDHHC15Q96MV8 337 aa27.51■■□□□ 1.99
TNFRSF25-208ENST00000453341 CUL9Q8IWT3 2517 aa27.51■■□□□ 1.99
TNFRSF25-208ENST00000453341 INPP5BP32019 993 aa27.5■■□□□ 1.99
TNFRSF25-208ENST00000453341 GRK4P32298 578 aa27.5■■□□□ 1.99
TNFRSF25-208ENST00000453341 PPATQ06203 517 aa27.5■■□□□ 1.99
TNFRSF25-208ENST00000453341 SUCLG2Q96I99 432 aa27.5■■□□□ 1.99
TNFRSF25-208ENST00000453341 C9orf78Q9NZ63 289 aaPredicted RBP27.5■■□□□ 1.99
TNFRSF25-208ENST00000453341 RPAP1Q9BWH6 1393 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 GJA8P48165 433 aa27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 EXOSC9Q06265 439 aaKnown RBP27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 FKBP1CQ5VVH2 108 aa27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 MIGA2Q7L4E1 593 aa27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 ANKRD23Q86SG2 305 aa27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 VPS37DQ86XT2 251 aa27.49■■□□□ 1.99
TNFRSF25-208ENST00000453341 TBC1D22AQ8WUA7 517 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms