RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 LRRC24Q50LG9 513 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 METTL24Q5JXM2 366 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 DZIP1LQ8IYY4 767 aaKnown RBP14.71□□□□□ -0.05
GARNL3-210ENST00000453030 ANKRD13AQ8IZ07 590 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 ELP3Q9H9T3 547 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 RIPOR2Q9Y4F9 1068 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 TRIM17Q9Y577 477 aa14.71□□□□□ -0.05
GARNL3-210ENST00000453030 ZSWIM8A7E2V4 1837 aa14.71□□□□□ -0.06
GARNL3-210ENST00000453030 UTYO14607 1347 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
GARNL3-210ENST00000453030 CRHR2Q13324 411 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 KLHDC4Q8TBB5 520 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 OPTNQ96CV9 577 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 TMEM39BQ9GZU3 492 aa14.7□□□□□ -0.06
GARNL3-210ENST00000453030 UNCXA6NJT0 531 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
GARNL3-210ENST00000453030 RABL6Q3YEC7 729 aaPredicted RBP14.69□□□□□ -0.06
GARNL3-210ENST00000453030 OTOP1Q7RTM1 612 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
GARNL3-210ENST00000453030 CD99L2Q8TCZ2 262 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 TEPSINQ96N21 525 aa14.69□□□□□ -0.06
GARNL3-210ENST00000453030 CACNB3P54284 484 aa14.68□□□□□ -0.06
GARNL3-210ENST00000453030 CAVIN4Q5BKX8 364 aa14.68□□□□□ -0.06
GARNL3-210ENST00000453030 PRPF38BQ5VTL8 546 aaKnown RBP14.68□□□□□ -0.06
GARNL3-210ENST00000453030 OTUD7BQ6GQQ9 843 aa14.68□□□□□ -0.06
GARNL3-210ENST00000453030 VGLL2Q8N8G2 317 aa14.68□□□□□ -0.06
GARNL3-210ENST00000453030 PTPRCP08575 1304 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 TNNI2P48788 182 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 VGLL4Q14135 290 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 ERO1AQ96HE7 468 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 PTPN18Q99952 460 aa14.67□□□□□ -0.06
GARNL3-210ENST00000453030 PDE8BO95263 885 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 BCAMP50895 628 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-210ENST00000453030 TBC1D22AQ8WUA7 517 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
GARNL3-210ENST00000453030 MYH2Q9UKX2 1941 aa14.65□□□□□ -0.06
GARNL3-210ENST00000453030 TESPA1A2RU30 521 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-210ENST00000453030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.06
GARNL3-210ENST00000453030 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
GARNL3-210ENST00000453030 TMOD2Q9NZR1 351 aa14.65□□□□□ -0.06
GARNL3-210ENST00000453030 CSADQ9Y600 493 aa14.65□□□□□ -0.06
GARNL3-210ENST00000453030 CCL15-CCL14A0A0B4J2E2 113 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 E9PSI1 815 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 CAP1Q01518 475 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 SP3Q02447 781 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
GARNL3-210ENST00000453030 TAF1CQ15572 869 aaPredicted RBP14.64□□□□□ -0.07
GARNL3-210ENST00000453030 CCL15Q16663 113 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 MAST3O60307 1309 aa14.64□□□□□ -0.07
GARNL3-210ENST00000453030 POTEFA5A3E0 1075 aa14.63□□□□□ -0.07
GARNL3-210ENST00000453030 IFIT1P09914 478 aaKnown RBP14.63□□□□□ -0.07
GARNL3-210ENST00000453030 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
GARNL3-210ENST00000453030 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
GARNL3-210ENST00000453030 ZDHHC15Q96MV8 337 aa14.63□□□□□ -0.07
GARNL3-210ENST00000453030 WRNIP1Q96S55 665 aa14.63□□□□□ -0.07
GARNL3-210ENST00000453030 PTPN22Q9Y2R2 807 aa14.63□□□□□ -0.07
GARNL3-210ENST00000453030 SLC5A1P13866 664 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 FGFR2P21802 821 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 GTF2A2P52657 109 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 SMC4Q9NTJ3 1288 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 SNCAIPQ9Y6H5 919 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 KIF16BQ96L93 1317 aa14.62□□□□□ -0.07
GARNL3-210ENST00000453030 RPAP1Q9BWH6 1393 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-210ENST00000453030 SPDYE5A6NIY4 337 aa14.61□□□□□ -0.07
GARNL3-210ENST00000453030 EYA2O00167 538 aa14.61□□□□□ -0.07
GARNL3-210ENST00000453030 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-210ENST00000453030 APOBEC3HQ6NTF7 200 aaKnown RBP14.61□□□□□ -0.07
GARNL3-210ENST00000453030 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-210ENST00000453030 SIL1Q9H173 461 aa14.61□□□□□ -0.07
GARNL3-210ENST00000453030 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
GARNL3-210ENST00000453030 CEP290O15078 2479 aa14.6□□□□□ -0.07
GARNL3-210ENST00000453030 SLFN5Q08AF3 891 aa14.6□□□□□ -0.07
GARNL3-210ENST00000453030 INTS3Q68E01 1043 aaKnown RBP14.6□□□□□ -0.07
GARNL3-210ENST00000453030 FAM83AQ86UY5 434 aa14.6□□□□□ -0.07
GARNL3-210ENST00000453030 LPIN2Q92539 896 aa14.6□□□□□ -0.07
GARNL3-210ENST00000453030 SUGT1Q9Y2Z0 365 aa14.6□□□□□ -0.07
GARNL3-210ENST00000453030 MGAMO43451 1857 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 PTPRFP10586 1907 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-210ENST00000453030 ATG9AQ7Z3C6 839 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 ARMC5Q96C12 935 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 CDCA7LQ96GN5 454 aa14.59□□□□□ -0.07
GARNL3-210ENST00000453030 IRF6O14896 467 aa14.58□□□□□ -0.08
GARNL3-210ENST00000453030 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-210ENST00000453030 PRDX5P30044 214 aa14.58□□□□□ -0.08
GARNL3-210ENST00000453030 TCP10Q12799 353 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms