RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZBTB22O15209 634 aa24.59■■□□□ 1.53
COL9A3-202ENST00000452372 HSP90AB4PQ58FF6 505 aa24.59■■□□□ 1.53
COL9A3-202ENST00000452372 MFSD14BQ5SR56 506 aa24.59■■□□□ 1.53
COL9A3-202ENST00000452372 EXOC6BQ9Y2D4 811 aa24.59■■□□□ 1.53
COL9A3-202ENST00000452372 WNT10BO00744 389 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 PHKA1P46020 1223 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 CCDC102BQ68D86 513 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 ERC1Q8IUD2 1116 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 TBC1D22AQ8WUA7 517 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 CRBNQ96SW2 442 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 HDAC9Q9UKV0 1011 aa24.58■■□□□ 1.53
COL9A3-202ENST00000452372 CA12O43570 354 aa24.57■■□□□ 1.52
COL9A3-202ENST00000452372 CHAF1AQ13111 956 aaPredicted RBP24.57■■□□□ 1.52
COL9A3-202ENST00000452372 TNNI3KQ59H18 835 aa24.57■■□□□ 1.52
COL9A3-202ENST00000452372 SUPT16HQ9Y5B9 1047 aaKnown RBP24.57■■□□□ 1.52
COL9A3-202ENST00000452372 FPGT-TNNI3KV9GXZ4 949 aa24.57■■□□□ 1.52
COL9A3-202ENST00000452372 MYH13Q9UKX3 1938 aa24.57■■□□□ 1.52
COL9A3-202ENST00000452372 SEMA3EO15041 775 aa24.56■■□□□ 1.52
COL9A3-202ENST00000452372 ZNF157P51786 506 aaPredicted RBP24.56■■□□□ 1.52
COL9A3-202ENST00000452372 PRAMEF18Q5VWM3 479 aa24.56■■□□□ 1.52
COL9A3-202ENST00000452372 CCDC102AQ96A19 550 aa24.56■■□□□ 1.52
COL9A3-202ENST00000452372 ZBED3Q96IU2 234 aaPredicted RBP24.56■■□□□ 1.52
COL9A3-202ENST00000452372 KIF23Q02241 960 aaPredicted RBP24.55■■□□□ 1.52
COL9A3-202ENST00000452372 WDR66Q8TBY9 1149 aa24.55■■□□□ 1.52
COL9A3-202ENST00000452372 ABHD8Q96I13 439 aa24.55■■□□□ 1.52
COL9A3-202ENST00000452372 DENND2AQ9ULE3 1009 aa24.55■■□□□ 1.52
COL9A3-202ENST00000452372 F8W031 263 aaPredicted RBP24.54■■□□□ 1.52
COL9A3-202ENST00000452372 GORABQ5T7V8 394 aa24.54■■□□□ 1.52
COL9A3-202ENST00000452372 MOB2Q70IA6 237 aa24.54■■□□□ 1.52
COL9A3-202ENST00000452372 SLC10A3P09131 477 aa24.53■■□□□ 1.52
COL9A3-202ENST00000452372 MTMR14Q8NCE2 650 aa24.53■■□□□ 1.52
COL9A3-202ENST00000452372 RHPN1Q8TCX5 695 aa24.53■■□□□ 1.52
COL9A3-202ENST00000452372 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
COL9A3-202ENST00000452372 RAB11FIP3O75154 756 aa24.52■■□□□ 1.52
COL9A3-202ENST00000452372 EAF2Q96CJ1 260 aaPredicted RBP24.52■■□□□ 1.52
COL9A3-202ENST00000452372 CSRNP1Q96S65 589 aa24.52■■□□□ 1.52
COL9A3-202ENST00000452372 TTF2Q9UNY4 1162 aaKnown RBP24.52■■□□□ 1.52
COL9A3-202ENST00000452372 PCDHB15Q9Y5E8 787 aa24.52■■□□□ 1.52
COL9A3-202ENST00000452372 COL1A1P02452 1464 aaPredicted RBP24.51■■□□□ 1.51
COL9A3-202ENST00000452372 FKBP1BP68106 108 aa24.51■■□□□ 1.51
COL9A3-202ENST00000452372 GRIK5Q16478 980 aa24.51■■□□□ 1.51
COL9A3-202ENST00000452372 KIF1BPQ96EK5 621 aa24.51■■□□□ 1.51
COL9A3-202ENST00000452372 AAMPQ13685 434 aa24.5■■□□□ 1.51
COL9A3-202ENST00000452372 RASGRF1Q13972 1273 aa24.5■■□□□ 1.51
COL9A3-202ENST00000452372 DLGAP5Q15398 846 aa24.5■■□□□ 1.51
COL9A3-202ENST00000452372 DBNDD2Q9BQY9 259 aa24.5■■□□□ 1.51
COL9A3-202ENST00000452372 PDS5AQ29RF7 1337 aaKnown RBP24.5■■□□□ 1.51
COL9A3-202ENST00000452372 PAPPA2Q9BXP8 1791 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 UBE2Q2LH0YL09 131 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 ARID4AP29374 1257 aaPredicted RBP24.49■■□□□ 1.51
COL9A3-202ENST00000452372 CFAP100Q494V2 611 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 RASAL3Q86YV0 1011 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 CCDC8Q9H0W5 538 aaPredicted RBP24.49■■□□□ 1.51
COL9A3-202ENST00000452372 DBNLQ9UJU6 430 aaKnown RBP24.49■■□□□ 1.51
COL9A3-202ENST00000452372 SERPINA10Q9UK55 444 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 SALL1Q9NSC2 1324 aa24.49■■□□□ 1.51
COL9A3-202ENST00000452372 APBB1O00213 710 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 UQCRFS1P1P0C7P4 283 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 HDLBPQ00341 1268 aaKnown RBP24.48■■□□□ 1.51
COL9A3-202ENST00000452372 CCDC158Q5M9N0 1113 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 MRIQ9BWK5 157 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 DCTPP1Q9H773 170 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 IL1RAPL2Q9NP60 686 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 RNF186Q9NXI6 227 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 AKAP11Q9UKA4 1901 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 PCDHAC2Q9Y5I4 1007 aa24.48■■□□□ 1.51
COL9A3-202ENST00000452372 CLASRPQ8N2M8 674 aaKnown RBP24.47■■□□□ 1.51
COL9A3-202ENST00000452372 HMG20BQ9P0W2 317 aa24.47■■□□□ 1.51
COL9A3-202ENST00000452372 SPDYE2BA6NHP3 402 aa24.46■■□□□ 1.51
COL9A3-202ENST00000452372 SPDYE6P0CI01 402 aa24.46■■□□□ 1.51
COL9A3-202ENST00000452372 RBM5P52756 815 aaKnown RBP eCLIP24.46■■□□□ 1.51
COL9A3-202ENST00000452372 TTC39AQ5SRH9 613 aa24.46■■□□□ 1.51
COL9A3-202ENST00000452372 AACSQ86V21 672 aa24.46■■□□□ 1.51
COL9A3-202ENST00000452372 ZNF512BQ96KM6 892 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-202ENST00000452372 PRMT6Q96LA8 375 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-202ENST00000452372 SAGE1Q9NXZ1 904 aa24.46■■□□□ 1.51
COL9A3-202ENST00000452372 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
COL9A3-202ENST00000452372 MAST3O60307 1309 aa24.45■■□□□ 1.5
COL9A3-202ENST00000452372 TRPA1O75762 1119 aa24.45■■□□□ 1.5
COL9A3-202ENST00000452372 CRKP46108 304 aa24.45■■□□□ 1.5
COL9A3-202ENST00000452372 ZGPATQ8N5A5 531 aaKnown RBP24.45■■□□□ 1.5
COL9A3-202ENST00000452372 SPATA5Q8NB90 893 aa24.45■■□□□ 1.5
COL9A3-202ENST00000452372 AOX1Q06278 1338 aa24.44■■□□□ 1.5
COL9A3-202ENST00000452372 LDHBP07195 334 aaKnown RBP24.44■■□□□ 1.5
COL9A3-202ENST00000452372 MCAMP43121 646 aa24.44■■□□□ 1.5
COL9A3-202ENST00000452372 MCOLN1Q9GZU1 580 aa24.44■■□□□ 1.5
COL9A3-202ENST00000452372 PRDX5P30044 214 aa24.43■■□□□ 1.5
COL9A3-202ENST00000452372 EXOC6Q8TAG9 804 aa24.43■■□□□ 1.5
COL9A3-202ENST00000452372 TEKT1Q969V4 418 aa24.43■■□□□ 1.5
COL9A3-202ENST00000452372 LRRCC1Q9C099 1032 aa24.43■■□□□ 1.5
COL9A3-202ENST00000452372 ECM29Q5VYK3 1845 aa24.42■■□□□ 1.5
COL9A3-202ENST00000452372 MYO1BO43795 1136 aa24.42■■□□□ 1.5
COL9A3-202ENST00000452372 SPTY2D1Q68D10 685 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-202ENST00000452372 HHIPL2Q6UWX4 724 aa24.42■■□□□ 1.5
COL9A3-202ENST00000452372 PI16Q6UXB8 463 aa24.42■■□□□ 1.5
COL9A3-202ENST00000452372 APOBEC3FQ8IUX4 373 aaKnown RBP24.42■■□□□ 1.5
COL9A3-202ENST00000452372 ABCF2Q9UG63 623 aa24.42■■□□□ 1.5
COL9A3-202ENST00000452372 LDLRAD1Q5T700 205 aa24.41■■□□□ 1.5
COL9A3-202ENST00000452372 ZDHHC15Q96MV8 337 aa24.41■■□□□ 1.5
COL9A3-202ENST00000452372 IFIT2P09913 472 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms