RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 GLRX3O76003 335 aaKnown RBP29.29■■■□□ 2.28
CPSF4-207ENST00000451876 LDHBP07195 334 aaKnown RBP29.29■■■□□ 2.28
CPSF4-207ENST00000451876 SAMD7Q7Z3H4 446 aa29.29■■■□□ 2.28
CPSF4-207ENST00000451876 ZNF784Q8NCA9 323 aaPredicted RBP29.29■■■□□ 2.28
CPSF4-207ENST00000451876 PAG1Q9NWQ8 432 aa29.29■■■□□ 2.28
CPSF4-207ENST00000451876 SUGT1Q9Y2Z0 365 aa29.29■■■□□ 2.28
CPSF4-207ENST00000451876 OGFOD1Q8N543 542 aa29.28■■■□□ 2.28
CPSF4-207ENST00000451876 OSBPL3Q9H4L5 887 aa29.28■■■□□ 2.28
CPSF4-207ENST00000451876 MAP4K4O95819 1239 aaPredicted RBP29.27■■■□□ 2.28
CPSF4-207ENST00000451876 EPHX2P34913 555 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 ZNF384Q8TF68 577 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 TAF1DQ9H5J8 278 aaPredicted RBP29.27■■■□□ 2.28
CPSF4-207ENST00000451876 PCDHAC2Q9Y5I4 1007 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 AOX1Q06278 1338 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 H7C1D1 291 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 VEGFAP15692 232 aaPredicted RBP29.27■■■□□ 2.28
CPSF4-207ENST00000451876 ERICH6Q7L0X2 663 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 TRPM4Q8TD43 1214 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 MYOZ2Q9NPC6 264 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 LRP2BPQ9P2M1 347 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 ECM29Q5VYK3 1845 aa29.27■■■□□ 2.28
CPSF4-207ENST00000451876 AK9Q5TCS8 1911 aa29.26■■■□□ 2.28
CPSF4-207ENST00000451876 DIXDC1Q155Q3 683 aa29.26■■■□□ 2.27
CPSF4-207ENST00000451876 TBC1D10BQ4KMP7 808 aaPredicted RBP29.26■■■□□ 2.27
CPSF4-207ENST00000451876 ADARB2Q9NS39 739 aaKnown RBP29.26■■■□□ 2.27
CPSF4-207ENST00000451876 HDAC9Q9UKV0 1011 aa29.26■■■□□ 2.27
CPSF4-207ENST00000451876 MECOMQ03112 1051 aa29.25■■■□□ 2.27
CPSF4-207ENST00000451876 RBM26Q5T8P6 1007 aaKnown RBP29.25■■■□□ 2.27
CPSF4-207ENST00000451876 SPTY2D1Q68D10 685 aaPredicted RBP29.25■■■□□ 2.27
CPSF4-207ENST00000451876 RAI14Q9P0K7 980 aa29.25■■■□□ 2.27
CPSF4-207ENST00000451876 IDH1O75874 414 aaKnown RBP29.24■■■□□ 2.27
CPSF4-207ENST00000451876 TTF1Q15361 905 aaPredicted RBP29.24■■■□□ 2.27
CPSF4-207ENST00000451876 DZIP1Q86YF9 867 aaKnown RBP29.24■■■□□ 2.27
CPSF4-207ENST00000451876 GTF3C3Q9Y5Q9 886 aa29.24■■■□□ 2.27
CPSF4-207ENST00000451876 MAST3O60307 1309 aa29.24■■■□□ 2.27
CPSF4-207ENST00000451876 NSUN4Q96CB9 384 aaKnown RBP29.23■■■□□ 2.27
CPSF4-207ENST00000451876 CRKP46108 304 aa29.23■■■□□ 2.27
CPSF4-207ENST00000451876 HIRAP54198 1017 aaPredicted RBP29.23■■■□□ 2.27
CPSF4-207ENST00000451876 KIF4BQ2VIQ3 1234 aa29.23■■■□□ 2.27
CPSF4-207ENST00000451876 SERPINA10Q9UK55 444 aa29.23■■■□□ 2.27
CPSF4-207ENST00000451876 POTEIP0CG38 1075 aa29.22■■■□□ 2.27
CPSF4-207ENST00000451876 POTEJP0CG39 1038 aa29.22■■■□□ 2.27
CPSF4-207ENST00000451876 CFAP100Q494V2 611 aa29.22■■■□□ 2.27
CPSF4-207ENST00000451876 TEKT1Q969V4 418 aa29.21■■■□□ 2.27
CPSF4-207ENST00000451876 MMP14P50281 582 aa29.2■■■□□ 2.27
CPSF4-207ENST00000451876 RBM5P52756 815 aaKnown RBP eCLIP29.2■■■□□ 2.273e-9■□□□□ 10.6
CPSF4-207ENST00000451876 HDLBPQ00341 1268 aaKnown RBP29.2■■■□□ 2.27
CPSF4-207ENST00000451876 EAPPQ56P03 285 aaPredicted RBP29.2■■■□□ 2.27
CPSF4-207ENST00000451876 WNT10BO00744 389 aa29.2■■■□□ 2.26
CPSF4-207ENST00000451876 KIF3CO14782 793 aa29.2■■■□□ 2.26
CPSF4-207ENST00000451876 NBPF9Q3BBW0 867 aa29.2■■■□□ 2.26
CPSF4-207ENST00000451876 USP50Q70EL3 339 aaPredicted RBP29.2■■■□□ 2.26
CPSF4-207ENST00000451876 ZBED3Q96IU2 234 aaPredicted RBP29.2■■■□□ 2.26
CPSF4-207ENST00000451876 ASTN2O75129 1339 aaPredicted RBP29.19■■■□□ 2.26
CPSF4-207ENST00000451876 CHGBP05060 677 aa29.19■■■□□ 2.26
CPSF4-207ENST00000451876 MAP3K12Q12852 859 aa29.19■■■□□ 2.26
CPSF4-207ENST00000451876 PRMT6Q96LA8 375 aaPredicted RBP29.19■■■□□ 2.26
CPSF4-207ENST00000451876 DAGLAQ9Y4D2 1042 aa29.19■■■□□ 2.26
CPSF4-207ENST00000451876 POLR2AP24928 1970 aaKnown RBP29.18■■■□□ 2.26
CPSF4-207ENST00000451876 SPDYE2BA6NHP3 402 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 SPDYE6P0CI01 402 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 GSPT1P15170 499 aaKnown RBP29.18■■■□□ 2.26
CPSF4-207ENST00000451876 RGS3P49796 1198 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 DLGAP5Q15398 846 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 HHIPL2Q6UWX4 724 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 ADGRA1Q86SQ6 560 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 MAGEB6Q8N7X4 407 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 KBTBD3Q8NAB2 608 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 MTMR14Q8NCE2 650 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 MRIQ9BWK5 157 aa29.18■■■□□ 2.26
CPSF4-207ENST00000451876 GAKO14976 1311 aa29.17■■■□□ 2.26
CPSF4-207ENST00000451876 TTC22Q5TAA0 569 aa29.17■■■□□ 2.26
CPSF4-207ENST00000451876 NAA16Q6N069 864 aaPredicted RBP29.17■■■□□ 2.26
CPSF4-207ENST00000451876 PNMA8AQ86V59 439 aaPredicted RBP29.17■■■□□ 2.26
CPSF4-207ENST00000451876 ZDHHC15Q96MV8 337 aa29.17■■■□□ 2.26
CPSF4-207ENST00000451876 MROH7-TTC4A0A0A0MT08 1334 aa29.17■■■□□ 2.26
CPSF4-207ENST00000451876 SLFNL1Q499Z3 407 aa29.16■■■□□ 2.26
CPSF4-207ENST00000451876 PDE6AP16499 860 aa29.16■■■□□ 2.26
CPSF4-207ENST00000451876 SLC9C2Q5TAH2 1124 aa29.16■■■□□ 2.26
CPSF4-207ENST00000451876 APOBEC3HQ6NTF7 200 aaKnown RBP29.16■■■□□ 2.26
CPSF4-207ENST00000451876 CDK5RAP2Q96SN8 1893 aa29.14■■■□□ 2.26
CPSF4-207ENST00000451876 TRIM6-TRIM34B2RNG4 842 aa29.14■■■□□ 2.26
CPSF4-207ENST00000451876 GSTO1P78417 241 aa29.14■■■□□ 2.26
CPSF4-207ENST00000451876 EVI5LQ96CN4 794 aa29.14■■■□□ 2.26
CPSF4-207ENST00000451876 FAM163AQ96GL9 167 aaPredicted RBP29.14■■■□□ 2.26
CPSF4-207ENST00000451876 FSD1Q9BTV5 496 aa29.14■■■□□ 2.26
CPSF4-207ENST00000451876 TCRBV5S4A2TA0A5A2 114 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 IGSF3O75054 1194 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 CYP7A1P22680 504 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 ADD2P35612 726 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 SLF2Q8IX21 1173 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.13■■■□□ 2.25
CPSF4-207ENST00000451876 ZNF532Q9HCE3 1301 aa29.13■■■□□ 2.25
CPSF4-207ENST00000451876 RILPL2Q969X0 211 aa29.12■■■□□ 2.25
CPSF4-207ENST00000451876 TDRD3Q9H7E2 651 aaKnown RBP29.12■■■□□ 2.25
CPSF4-207ENST00000451876 BTDP43251 543 aa29.12■■■□□ 2.25
CPSF4-207ENST00000451876 GGA3Q9NZ52 723 aa29.12■■■□□ 2.25
CPSF4-207ENST00000451876 CLRN2A0PK11 232 aa29.11■■■□□ 2.25
CPSF4-207ENST00000451876 LDHCP07864 332 aa29.11■■■□□ 2.25
CPSF4-207ENST00000451876 ANGEL2Q5VTE6 544 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms